RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 FBXO47Q5MNV8 452 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 GPATCH4Q5T3I0 446 aaKnown RBP17.42■□□□□ 0.38
HDAC6-214ENST00000465269 ASTLQ6HA08 431 aaPredicted RBP17.42■□□□□ 0.38
HDAC6-214ENST00000465269 CYFIP1Q7L576 1253 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 CRIPAKQ8N1N5 446 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 CNTNAP3BQ96NU0 1288 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 NEK1Q96PY6 1258 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 CNTNAP3Q9BZ76 1288 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
HDAC6-214ENST00000465269 GNAT1P11488 350 aa17.41■□□□□ 0.38
HDAC6-214ENST00000465269 DGLUCYQ7Z3D6 616 aa17.41■□□□□ 0.38
HDAC6-214ENST00000465269 KIAA2013Q8IYS2 634 aa17.41■□□□□ 0.38
HDAC6-214ENST00000465269 DNAJB3Q8WWF6 145 aa17.41■□□□□ 0.38
HDAC6-214ENST00000465269 GPR20Q99678 358 aa17.41■□□□□ 0.38
HDAC6-214ENST00000465269 CDY2AQ9Y6F7 541 aa17.41■□□□□ 0.38
HDAC6-214ENST00000465269 MAP1BP46821 2468 aaKnown RBP17.41■□□□□ 0.38
HDAC6-214ENST00000465269 PI15O43692 258 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 WEE2P0C1S8 567 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 MTMR3Q13615 1198 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 NAALADL2Q58DX5 795 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 PLPP4Q5VZY2 271 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 ANKRD54Q6NXT1 300 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 STOX1Q6ZVD7 989 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 FCHSD1Q86WN1 690 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 FLCNQ8NFG4 579 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 SORCS3Q9UPU3 1222 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 NEDD4P46934 1319 aa17.4■□□□□ 0.38
HDAC6-214ENST00000465269 OTOGLQ3ZCN5 2332 aa17.39■□□□□ 0.38
HDAC6-214ENST00000465269 GPR179Q6PRD1 2367 aa17.39■□□□□ 0.38
HDAC6-214ENST00000465269 TMEM62Q0P6H9 643 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.37
HDAC6-214ENST00000465269 NPAS4Q8IUM7 802 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 TTC14Q96N46 770 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 USP26Q9BXU7 913 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 MFSD1Q9H3U5 465 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 POMKQ9H5K3 350 aa17.39■□□□□ 0.37
HDAC6-214ENST00000465269 MARK3P27448 753 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 CCND2P30279 289 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 KCNC3Q14003 757 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 ALX1Q15699 326 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 SPOUT1Q5T280 376 aaKnown RBP17.38■□□□□ 0.37
HDAC6-214ENST00000465269 TSHZ1Q6ZSZ6 1077 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 FEZF2Q8TBJ5 459 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 KCNG4Q8TDN1 519 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 FAM227BQ96M60 508 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
HDAC6-214ENST00000465269 RTEL1Q9NZ71 1219 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
HDAC6-214ENST00000465269 HIDE1A8MVS5 230 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 FGF18O76093 207 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 TGFB3P10600 412 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 IGBP1P78318 339 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 MRPS9P82933 396 aaKnown RBP17.37■□□□□ 0.37
HDAC6-214ENST00000465269 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 KANK3Q6NY19 840 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 METTL7BQ6UX53 244 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 UBALD2Q8IYN6 164 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 TMEM260Q9NX78 707 aa17.37■□□□□ 0.37
HDAC6-214ENST00000465269 BAHCC1Q9P281 2608 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 A0A0D9SFI3 127 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 FSCN2O14926 492 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 SCG2P13521 617 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 PPFIA1Q13136 1202 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 MARCH8Q5T0T0 291 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 C20orf194Q5TEA3 1177 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 MFSD6Q6ZSS7 791 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 MAF1Q9H063 256 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 TMX1Q9H3N1 280 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 LIMD1Q9UGP4 676 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 TUBE1Q9UJT0 475 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 ZNF215Q9UL58 517 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-214ENST00000465269 R4GN57 208 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 USP24Q9UPU5 2620 aa17.36■□□□□ 0.37
HDAC6-214ENST00000465269 MRPS6P82932 125 aaKnown RBP17.35■□□□□ 0.37
HDAC6-214ENST00000465269 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
HDAC6-214ENST00000465269 GHRHRQ02643 423 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 ANGPT1Q15389 498 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 GRIK4Q16099 956 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 TMEM266Q2M3C6 531 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 FAM102BQ5T8I3 360 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 ZNF589Q86UQ0 364 aaPredicted RBP17.35■□□□□ 0.37
HDAC6-214ENST00000465269 THNSL1Q8IYQ7 743 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 AMNQ9BXJ7 453 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 DCTPP1Q9H773 170 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 PADI3Q9ULW8 664 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 NR2E1Q9Y466 385 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 NRCAMQ92823 1304 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 LOXHD1Q8IVV2 1947 aa17.35■□□□□ 0.37
HDAC6-214ENST00000465269 TBKBP1A7MCY6 615 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 SPATA31C2B4DYI2 1134 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 MGEA5O60502 916 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 NPR3P17342 541 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 SLC35G1Q2M3R5 365 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms