RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 RASGRP4Q8TDF6 673 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 GPRASP2Q96D09 838 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 EAF1Q96JC9 268 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-204ENST00000465167 DNAJC2Q99543 621 aaKnown RBP6.96□□□□□ -1.3
SSBP1-204ENST00000465167 APBA2Q99767 749 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.37e-14■□□□□ 9.4
SSBP1-204ENST00000465167 PAK6Q9NQU5 681 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-204ENST00000465167 MORF4L1Q9UBU8 362 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 DBNLQ9UJU6 430 aaKnown RBP6.96□□□□□ -1.3
SSBP1-204ENST00000465167 CYP8B1Q9UNU6 501 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 EXOC6BQ9Y2D4 811 aa6.96□□□□□ -1.3
SSBP1-204ENST00000465167 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-204ENST00000465167 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 AMPD1P23109 780 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 FAM117BQ6P1L5 589 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 CEP85Q6P2H3 762 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 TXNDC11Q6PKC3 985 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 GPR142Q7Z601 462 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 PLEKHH3Q7Z736 793 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 C7orf61Q8IZ16 206 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 SLC7A3Q8WY07 619 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-204ENST00000465167 KIF1BPQ96EK5 621 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 PAWRQ96IZ0 340 aaKnown RBP6.95□□□□□ -1.3
SSBP1-204ENST00000465167 P2RX7Q99572 595 aaKnown RBP6.95□□□□□ -1.3
SSBP1-204ENST00000465167 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 EMILIN2Q9BXX0 1053 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 C11orf49Q9H6J7 331 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 OSGEPQ9NPF4 335 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 SLC5A4Q9NY91 659 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 PRKAG2Q9UGJ0 569 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 DDX19BQ9UMR2 479 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 RABGAP1Q9Y3P9 1069 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 PCDHB5Q9Y5E4 795 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 MYH7P12883 1935 aa6.95□□□□□ -1.3
SSBP1-204ENST00000465167 FSCN2O14926 492 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 MSCO60682 206 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 NID1P14543 1247 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 ARL4DP49703 201 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 IRX6P78412 446 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 GSTM4Q03013 218 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 ARID5AQ03989 594 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 ZNF252P-AS1Q0IIN9 211 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 AP3B2Q13367 1082 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 LRRC14Q15048 493 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 SLC9C2Q5TAH2 1124 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 UBE2Q1Q7Z7E8 422 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 ADGRA1Q86SQ6 560 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 TRIM42Q8IWZ5 723 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 GOLM1Q8NBJ4 401 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 GRIN3AQ8TCU5 1115 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 TRIB2Q92519 343 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 EAF2Q96CJ1 260 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 GPATCH3Q96I76 525 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 RPAP3Q9H6T3 665 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-204ENST00000465167 DNAJC18Q9H819 358 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 IL1RAPL2Q9NP60 686 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 MCM9Q9NXL9 1143 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 SWAP70Q9UH65 585 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 PLXNB2O15031 1838 aa6.94□□□□□ -1.3
SSBP1-204ENST00000465167 FRMPD3Q5JV73 1810 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 SLC15A5A6NIM6 579 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 GOLIM4O00461 696 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 TM4SF5O14894 197 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 RRP9O43818 475 aaKnown RBP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 PDE6AP16499 860 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 VCAM1P19320 739 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 CNGA1P29973 690 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 DGKGP49619 791 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 SNAP47Q5SQN1 464 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 L1TD1Q5T7N2 865 aaKnown RBP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 ZSCAN25Q6NSZ9 544 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 TATDN1Q6P1N9 297 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 TMEM179Q6ZVK1 233 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 DPP9Q86TI2 863 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 DMRTC2Q8IXT2 367 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 RPAP2Q8IXW5 612 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 PANK1Q8TE04 598 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 EDC3Q96F86 508 aaKnown RBP6.93□□□□□ -1.3
SSBP1-204ENST00000465167 C12orf42Q96LP6 360 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 NRSN2Q9GZP1 204 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 CBX8Q9HC52 389 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 HOXC10Q9NYD6 342 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 GJD2Q9UKL4 321 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 ALPK3Q96L96 1907 aa6.93□□□□□ -1.3
SSBP1-204ENST00000465167 GSTP1P09211 210 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms