RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZBTB48P10074 688 aaPredicted RBP8.54□□□□□ -1.04
PTCD3-205ENST00000464541 RPL13P26373 211 aaKnown RBP8.54□□□□□ -1.04
PTCD3-205ENST00000464541 DLX2Q07687 328 aaPredicted RBP8.54□□□□□ -1.04
PTCD3-205ENST00000464541 CC2D1AQ6P1N0 951 aaPredicted RBP8.54□□□□□ -1.04
PTCD3-205ENST00000464541 IGDCC4Q8TDY8 1250 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 A0A087X0B3 334 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 PRAMEF25A6NGN4 478 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 KCNK3O14649 394 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 KPNA6O60684 536 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 MYCLP1P12525 358 aaPredicted RBP8.53□□□□□ -1.04
PTCD3-205ENST00000464541 AOAHP28039 575 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 JAG1P78504 1218 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 PRR31Q5SQ13 230 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 PKN3Q6P5Z2 889 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 TMC5Q6UXY8 1006 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 LIPIQ6XZB0 460 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 MTFR1LQ9H019 292 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 SPATA6Q9NWH7 488 aaPredicted RBP8.53□□□□□ -1.04
PTCD3-205ENST00000464541 WASF3Q9UPY6 502 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
PTCD3-205ENST00000464541 H7C1D1 291 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 PDE8AO60658 829 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 F2P00734 622 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 SMAD4Q13485 552 aaKnown RBP8.52□□□□□ -1.05
PTCD3-205ENST00000464541 SEC23AQ15436 765 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 CPZQ66K79 652 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 ACSS2Q9NR19 701 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 ARHGAP28Q9P2N2 729 aa8.52□□□□□ -1.05
PTCD3-205ENST00000464541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-205ENST00000464541 FOXP2O15409 715 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 GAS7O60861 476 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 ZSCAN22P10073 491 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-205ENST00000464541 FNTBP49356 437 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 PFKPQ01813 784 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 ZNF174Q15697 407 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 SKIDA1Q1XH10 827 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-205ENST00000464541 SYT3Q9BQG1 590 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 ASB1Q9Y576 335 aa8.51□□□□□ -1.05
PTCD3-205ENST00000464541 CYP17A1P05093 508 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 SARSP49591 514 aaKnown RBP8.5□□□□□ -1.05
PTCD3-205ENST00000464541 DSG1Q02413 1049 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 FSTL4Q6MZW2 842 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 STK32CQ86UX6 486 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 THNSL2Q86YJ6 484 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 SP8Q8IXZ3 490 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 CARFQ8N187 725 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 TP53I13Q8NBR0 393 aaPredicted RBP8.5□□□□□ -1.05
PTCD3-205ENST00000464541 OR2W6PQ8NHA6 318 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 PCIF1Q9H4Z3 704 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 LUC7LQ9NQ29 371 aaKnown RBP8.5□□□□□ -1.05
PTCD3-205ENST00000464541 IFT57Q9NWB7 429 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 BTBD7Q9P203 1132 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 ARHGAP20Q9P2F6 1191 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 RBPJLQ9UBG7 517 aa8.5□□□□□ -1.05
PTCD3-205ENST00000464541 ZNF28P17035 718 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 PTGS1P23219 599 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 SOX5P35711 763 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 STAT3P40763 770 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 MASP1P48740 699 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 SCNN1BP51168 640 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 OCRLQ01968 901 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 PCBP1Q15365 356 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTCD3-205ENST00000464541 SCYL1Q96KG9 808 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 CAAP1Q9H8G2 361 aa8.49□□□□□ -1.05
PTCD3-205ENST00000464541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTCD3-205ENST00000464541 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-205ENST00000464541 KRT37O76014 449 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 FBXO21O94952 628 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 VIL1P09327 827 aaKnown RBP8.48□□□□□ -1.05
PTCD3-205ENST00000464541 KIF11P52732 1056 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 TMEM132BQ14DG7 1078 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
PTCD3-205ENST00000464541 DHCR24Q15392 516 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 FAM26FQ5R3K3 315 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 DPP8Q6V1X1 898 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-205ENST00000464541 RNF180Q86T96 592 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 NME9Q86XW9 330 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 KIAA1958Q8N8K9 716 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 ASB15Q8WXK1 588 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 E2F7Q96AV8 911 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 SPO11Q9Y5K1 396 aa8.48□□□□□ -1.05
PTCD3-205ENST00000464541 MMEP08473 750 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 ATP2A2P16615 1042 aaKnown RBP8.47□□□□□ -1.05
PTCD3-205ENST00000464541 CANXP27824 592 aaKnown RBP8.47□□□□□ -1.05
PTCD3-205ENST00000464541 SMAD2Q15796 467 aaKnown RBP8.47□□□□□ -1.05
PTCD3-205ENST00000464541 CATSPEREQ5SY80 951 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 PRAMEF18Q5VWM3 479 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 CREB3L3Q68CJ9 461 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 LCNL1Q6ZST4 164 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 KRT26Q7Z3Y9 468 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 EFHBQ8N7U6 833 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 ZSWIM3Q96MP5 696 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 GBP4Q96PP9 640 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 SLC39A2Q9NP94 309 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 INCENPQ9NQS7 918 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 KCND1Q9NSA2 647 aa8.47□□□□□ -1.05
PTCD3-205ENST00000464541 GALNT8Q9NY28 637 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms