RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 MARCH8Q5T0T0 291 aa23.84■■□□□ 1.41
CPSF7-209ENST00000463244 DNAJB3Q8WWF6 145 aa23.84■■□□□ 1.41
CPSF7-209ENST00000463244 LZTS2Q9BRK4 669 aa23.84■■□□□ 1.41
CPSF7-209ENST00000463244 LOXHD1Q8IVV2 1947 aa23.83■■□□□ 1.41
CPSF7-209ENST00000463244 BTG3Q14201 252 aaPredicted RBP23.83■■□□□ 1.41
CPSF7-209ENST00000463244 TSHZ1Q6ZSZ6 1077 aa23.83■■□□□ 1.41
CPSF7-209ENST00000463244 PLVAPQ9BX97 442 aa23.83■■□□□ 1.41
CPSF7-209ENST00000463244 PSTPIP2Q9H939 334 aa23.83■■□□□ 1.41
CPSF7-209ENST00000463244 CDY2AQ9Y6F7 541 aa23.83■■□□□ 1.41
CPSF7-209ENST00000463244 KIAA1671Q9BY89 1806 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 SGSM2O43147 1006 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 DGKIO75912 1065 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 MMP1P03956 469 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 IRS1P35568 1242 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 LINC01599Q8WXQ3 324 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 GLG1Q92896 1179 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 MAP4K1Q92918 833 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 SMARCAD1Q9H4L7 1026 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 UBIAD1Q9Y5Z9 338 aa23.82■■□□□ 1.4
CPSF7-209ENST00000463244 MBTPS2O43462 519 aa23.81■■□□□ 1.4
CPSF7-209ENST00000463244 PLEKHA8P1O95397 391 aa23.81■■□□□ 1.4
CPSF7-209ENST00000463244 MRPS6P82932 125 aaKnown RBP23.81■■□□□ 1.4
CPSF7-209ENST00000463244 MTMR1Q13613 665 aa23.81■■□□□ 1.4
CPSF7-209ENST00000463244 CLUL1Q15846 466 aa23.81■■□□□ 1.4
CPSF7-209ENST00000463244 ALYREFQ86V81 257 aaKnown RBP23.81■■□□□ 1.4
CPSF7-209ENST00000463244 SRBD1Q8N5C6 995 aaKnown RBP23.81■■□□□ 1.4
CPSF7-209ENST00000463244 MTA3Q9BTC8 594 aa23.81■■□□□ 1.4
CPSF7-209ENST00000463244 UPF3BQ9BZI7 483 aaKnown RBP23.81■■□□□ 1.4
CPSF7-209ENST00000463244 AGO3Q9H9G7 860 aaKnown RBP23.81■■□□□ 1.4
CPSF7-209ENST00000463244 TBX10O75333 385 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 TECTAO75443 2155 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 RPLP2P05387 115 aaKnown RBP23.8■■□□□ 1.4
CPSF7-209ENST00000463244 GTF2F1P35269 517 aaKnown RBP eCLIP23.8■■□□□ 1.45e-10■■■■■ 57.2
CPSF7-209ENST00000463244 GNAQP50148 359 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 CAMK1Q14012 370 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 CRIPAKQ8N1N5 446 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 POP1Q99575 1024 aaKnown RBP23.8■■□□□ 1.4
CPSF7-209ENST00000463244 ALG13Q9NP73 1137 aaKnown RBP23.8■■□□□ 1.4
CPSF7-209ENST00000463244 PKD2L1Q9P0L9 805 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 PLAGL2Q9UPG8 496 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 SQORQ9Y6N5 450 aa23.8■■□□□ 1.4
CPSF7-209ENST00000463244 MAFGO15525 162 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 CD52P31358 61 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 IGBP1P78318 339 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 SMAD4Q13485 552 aaKnown RBP23.79■■□□□ 1.4
CPSF7-209ENST00000463244 CASC1Q6TDU7 716 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 CMTR1Q8N1G2 835 aaKnown RBP23.79■■□□□ 1.4
CPSF7-209ENST00000463244 P2RX5Q93086 422 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 FTHL17Q9BXU8 183 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 KCNH6Q9H252 994 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 JADE2Q9NQC1 790 aa23.79■■□□□ 1.4
CPSF7-209ENST00000463244 RBM8AQ9Y5S9 174 aaKnown RBP23.79■■□□□ 1.4
CPSF7-209ENST00000463244 RRN3P2A6NIE6 340 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 CSPG5O95196 566 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 INSRRP14616 1297 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 UBE2SQ16763 222 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 IER5Q5VY09 327 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 RTN4RL1Q86UN2 441 aaPredicted RBP23.78■■□□□ 1.4
CPSF7-209ENST00000463244 CMTR2Q8IYT2 770 aaKnown RBP23.78■■□□□ 1.4
CPSF7-209ENST00000463244 ZBTB10Q96DT7 871 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 PCYT2Q99447 389 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 FAM49AQ9H0Q0 323 aaPredicted RBP23.78■■□□□ 1.4
CPSF7-209ENST00000463244 IGFLR1Q9H665 355 aa23.78■■□□□ 1.4
CPSF7-209ENST00000463244 MRPL42Q9Y6G3 142 aaKnown RBP23.78■■□□□ 1.4
CPSF7-209ENST00000463244 SPDYE3A6NKU9 549 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 SH2B2O14492 632 aaPredicted RBP23.77■■□□□ 1.4
CPSF7-209ENST00000463244 LINC01565O15544 149 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 PRC1O43663 620 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 ADAM15Q13444 863 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 NAALADL2Q58DX5 795 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 HFE2Q6ZVN8 426 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 TMTC2Q8N394 836 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 FBXL18Q96ME1 805 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 JPH1Q9HDC5 661 aaPredicted RBP23.77■■□□□ 1.4
CPSF7-209ENST00000463244 MUTYHQ9UIF7 546 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 CD207Q9UJ71 328 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 USP34Q70CQ2 3546 aa23.77■■□□□ 1.4
CPSF7-209ENST00000463244 CCDC69A6NI79 296 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 RXRAP19793 462 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 HERC4Q5GLZ8 1057 aaPredicted RBP23.76■■□□□ 1.39
CPSF7-209ENST00000463244 NFXL1Q6ZNB6 911 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 NPAS4Q8IUM7 802 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 SLC9A2Q9UBY0 812 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 PADI3Q9ULW8 664 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 PCDHA6Q9UN73 950 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 PCDHA8Q9Y5H6 950 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 TRPV2Q9Y5S1 764 aa23.76■■□□□ 1.39
CPSF7-209ENST00000463244 ITGB1P05556 798 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 DNAJB1P25685 340 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 MCM5P33992 734 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 NHLH1Q02575 133 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 RNF135Q8IUD6 432 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 SPPL3Q8TCT6 385 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 PPP2R3CQ969Q6 453 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 TMEM87BQ96K49 555 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 MSLNLQ96KJ4 702 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 AZI2Q9H6S1 392 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 KCNH7Q9NS40 1196 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 TRPC6Q9Y210 931 aa23.75■■□□□ 1.39
CPSF7-209ENST00000463244 IGSF9BQ9UPX0 1349 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms