RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 IQCF3P0C7M6 154 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 SELPP16109 830 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 STAT5BP51692 787 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 JAK3P52333 1124 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 SHHQ15465 462 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 INF2Q27J81 1249 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 RPAINQ86UA6 219 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 DHX38Q92620 1227 aaKnown RBP14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 C8orf76Q96K31 380 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 FAM20AQ96MK3 541 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 DDX25Q9UHL0 483 aaKnown RBP14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 TELO2Q9Y4R8 837 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 UMODL1Q5DID0 1318 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 WDR64B1ANS9 1081 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 EPHB4P54760 987 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 PPFIA1Q13136 1202 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 TMEM240Q5SV17 173 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 TAF2Q6P1X5 1199 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 DIS3L2Q8IYB7 885 aaKnown RBP14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 FAM184AQ8NB25 1140 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 OXER1Q8TDS5 423 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 HERVK_113Q902F9 699 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 RNPEPQ9H4A4 650 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 PCDHA10Q9Y5I2 948 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 COL1A2P08123 1366 aa14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 TRIP12Q14669 1992 aaPredicted RBP14.78□□□□□ -0.04
R3HDM1-213ENST00000463230 GAS7O60861 476 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 TDP2O95551 362 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 CCL23P55773 120 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 LRCH2Q5VUJ6 765 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 LRRC8DQ7L1W4 858 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 ETNPPLQ8TBG4 499 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 RNPC3Q96LT9 517 aaKnown RBP14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 ZNF302Q9NR11 478 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 GJB4Q9NTQ9 266 aa14.77□□□□□ -0.04
R3HDM1-213ENST00000463230 MBLAC1A4D2B0 266 aaPredicted RBP14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 PSMD10O75832 226 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 FGBP02675 491 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 CKBP12277 381 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 ACTN1P12814 892 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 GRIK4Q16099 956 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 LETM2Q2VYF4 491 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 LMBR1Q8WVP7 490 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 TMX3Q96JJ7 454 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 FAM167AQ96KS9 214 aa14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 FOXP1Q9H334 677 aaPredicted RBP14.77□□□□□ -0.05
R3HDM1-213ENST00000463230 MYH9P35579 1960 aaKnown RBP14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 BACH1O14867 736 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 HBP1O60381 514 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 HIC1Q14526 733 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 C9orf50Q5SZB4 431 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 FAM43BQ6ZT52 329 aaPredicted RBP14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 C16orf59Q7L2K0 433 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 FBXO18Q8NFZ0 1043 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 ATP8B4Q8TF62 1192 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 PPP1R13LQ8WUF5 828 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 KCNMB3Q9NPA1 279 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 SETD4Q9NVD3 440 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 MAFBQ9Y5Q3 323 aaPredicted RBP14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 DNAH12Q6ZR08 3092 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 IGSF9BQ9UPX0 1349 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 DDX39AO00148 427 aaKnown RBP14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 NR5A1Q13285 461 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 B3GNT9Q6UX72 402 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 RSPH3Q86UC2 560 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 SLFN12Q8IYM2 578 aa14.76□□□□□ -0.05
R3HDM1-213ENST00000463230 WDR81Q562E7 1941 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 POTEB3A0JP26 581 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 BTBD18B2RXH4 712 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 TREHO43280 583 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 CXCL10P02778 98 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 ZNF200P98182 395 aaPredicted RBP14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 ZNF484Q5JVG2 852 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 FAM26DQ5JW98 314 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 PDXDC2PQ6P474 469 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 POTEBQ6S5H4 581 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 ZNF365Q70YC5 407 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 CCDC60Q8IWA6 550 aaPredicted RBP14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 DISC1Q9NRI5 854 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 TUBE1Q9UJT0 475 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 TRPC6Q9Y210 931 aa14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.75□□□□□ -0.05
R3HDM1-213ENST00000463230 CCNT1O60563 726 aaKnown RBP14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 BAIAP3O94812 1187 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 BAG4O95429 457 aaKnown RBP14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 MARK3P27448 753 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 PPP2R5CQ13362 524 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 SCLYQ96I15 445 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 EFCAB14O75071 495 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 INSRRP14616 1297 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 FAM109BQ6ICB4 259 aaPredicted RBP14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 SWSAP1Q6NVH7 229 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 TRAF7Q6Q0C0 670 aa14.74□□□□□ -0.05
R3HDM1-213ENST00000463230 CEP131Q9UPN4 1083 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms