RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 THAP5Q7Z6K1 395 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CATIPQ7Z7H3 387 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 RBM12BQ8IXT5 1001 aaKnown RBP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 DLG3Q92796 817 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 ACAP3Q96P50 834 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 TAAR9Q96RI9 348 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 ELAC2Q9BQ52 826 aaKnown RBP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 ANO3Q9BYT9 981 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 RNF38Q9H0F5 515 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 QRSL1Q9H0R6 528 aaKnown RBP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 CSRNP2Q9H175 543 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 EPB41L1Q9H4G0 881 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 LRRC4CQ9HCJ2 640 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 DDX21Q9NR30 783 aaKnown RBP eCLIP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 SEMA3GQ9NS98 782 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 PUF60Q9UHX1 559 aaKnown RBP4.84□□□□□ -1.63
GPNMB-205ENST00000463011 MSRAQ9UJ68 235 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 DSEQ9UL01 958 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 EDARQ9UNE0 448 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 SRPK3Q9UPE1 567 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 RAXQ9Y2V3 346 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 RWDD3Q9Y3V2 267 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 GPR45Q9Y5Y3 372 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 B3GALT1Q9Y5Z6 326 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 ATP23Q9Y6H3 246 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 X6R8D5 127 aa4.84□□□□□ -1.63
GPNMB-205ENST00000463011 A6NNZ2 444 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 SH3BP5O60239 455 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 CLASP2O75122 1294 aaKnown RBP4.83□□□□□ -1.64
GPNMB-205ENST00000463011 CEACAM5P06731 702 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 MYL3P08590 195 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 CLEC2LP0C7M8 214 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 TMEM253P0C7T8 217 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 OSMP13725 252 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 AGXTP21549 392 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 C5AR1P21730 350 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 HTR3AP46098 478 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 CLCN7P51798 805 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 USP14P54578 494 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 ADCY1Q08828 1119 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 LLGL1Q15334 1064 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 GRAMD1BQ3KR37 738 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 PLA2G4EQ3MJ16 856 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 HSP90AB4PQ58FF6 505 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 CC2D1AQ6P1N0 951 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-205ENST00000463011 TMPRSS7Q7RTY8 843 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 SKAP1Q86WV1 359 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 SIRT2Q8IXJ6 389 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 ZZZ3Q8IYH5 903 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 GRAMD1CQ8IYS0 662 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 NLGN4XQ8N0W4 816 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 Q8N1Y9 231 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 MIER2Q8N344 545 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 PPM1NQ8N819 430 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 PLEKHO2Q8TD55 490 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.83□□□□□ -1.64
GPNMB-205ENST00000463011 EAF2Q96CJ1 260 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-205ENST00000463011 FCRL2Q96LA5 508 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-205ENST00000463011 ORAI2Q96SN7 254 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 ATP13A1Q9HD20 1204 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 SLC6A20Q9NP91 592 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 KCNH7Q9NS40 1196 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 BSDC1Q9NW68 430 aaPredicted RBP4.83□□□□□ -1.64
GPNMB-205ENST00000463011 KCNG1Q9UIX4 513 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 PHTF1Q9UMS5 762 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 ZNF281Q9Y2X9 895 aa4.83□□□□□ -1.64
GPNMB-205ENST00000463011 RASSF10A6NK89 507 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 KRIT1O00522 736 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 SLC27A2O14975 620 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 PPFIA4O75335 1185 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 POU2F2P09086 479 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 ENPP1P22413 925 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 ZNF280AP59817 542 aaPredicted RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 KIF23Q02241 960 aaPredicted RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 FSCN1Q16658 493 aaKnown RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 UGT8Q16880 541 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 FIGNQ5HY92 759 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 CHST15Q7LFX5 561 aaPredicted RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 ZBTB34Q8NCN2 500 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 HPS3Q969F9 1004 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 ACO2Q99798 780 aaKnown RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 SSBP4Q9BWG4 385 aaPredicted RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 GTPBP4Q9BZE4 634 aaKnown RBP4.82□□□□□ -1.64
GPNMB-205ENST00000463011 UBA5Q9GZZ9 404 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 SEMA4AQ9H3S1 761 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 MKNK2Q9HBH9 465 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 PTPN22Q9Y2R2 807 aa4.82□□□□□ -1.64
GPNMB-205ENST00000463011 FAM90A27PA6NNH2 459 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 NDUFS2O75306 463 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 RHCEP18577 417 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 MTNR1BP49286 362 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 FXR1P51114 621 aaKnown RBP eCLIP4.81□□□□□ -1.64
GPNMB-205ENST00000463011 ADKP55263 362 aaKnown RBP4.81□□□□□ -1.64
GPNMB-205ENST00000463011 RHDQ02161 417 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 RALBP1Q15311 655 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
GPNMB-205ENST00000463011 ATAT1Q5SQI0 421 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms