RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 KCNQ2O43526 872 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 STARD3NLO95772 234 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 GSTM1P09488 218 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 HK2P52789 917 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 RASA3Q14644 834 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 BEND3Q5T5X7 828 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 SPATC1Q76KD6 591 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 LRP10Q7Z4F1 713 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 ZNF227Q86WZ6 799 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 MRGPRX3Q96LB0 322 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 DEPDC7Q96QD5 511 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 SRPK1Q96SB4 655 aaKnown RBP9.07□□□□□ -0.96
UBE4B-204ENST00000462658 CDADC1Q9BWV3 514 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 C19orf73Q9NVV2 129 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 SNTG2Q9NY99 539 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 TMEM59LQ9UK28 342 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 GPR55Q9Y2T6 319 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-204ENST00000462658 MAP3K2Q9Y2U5 619 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 ZNF281Q9Y2X9 895 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 C5P01031 1676 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 CACNA1FO60840 1977 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 ITGB4P16144 1822 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 STXBP3O00186 592 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 GNAI3P08754 354 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 AMPD2Q01433 879 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 POU4F1Q01851 419 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 HDAC1Q13547 482 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-204ENST00000462658 BMS1Q14692 1282 aaKnown RBP9.06□□□□□ -0.96
UBE4B-204ENST00000462658 CCDC144BQ3MJ40 725 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 TRIM59Q8IWR1 403 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 MEIS3Q99687 375 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 ZMYM5Q9UJ78 669 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 ADCY9O60503 1353 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 UBR2Q8IWV8 1755 aa9.06□□□□□ -0.96
UBE4B-204ENST00000462658 PXDNLA1KZ92 1463 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 ALDH1L1O75891 902 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 ZGLP1P0C6A0 271 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 CYP19A1P11511 503 aaPredicted RBP9.05□□□□□ -0.96
UBE4B-204ENST00000462658 ERVFC1P60507 584 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 RASGRF1Q13972 1273 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 DPH6Q7L8W6 267 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 BTN2A2Q8WVV5 523 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 G6PC3Q9BUM1 346 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 EPN3Q9H201 632 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 ADGRE2Q9UHX3 823 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 TUBGCP6Q96RT7 1819 aa9.05□□□□□ -0.96
UBE4B-204ENST00000462658 CASZ1Q86V15 1759 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 PALLDQ8WX93 1383 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 A0A1W2PQU0 124 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 GNAI2P04899 355 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 NOP2P46087 812 aaKnown RBP9.04□□□□□ -0.96
UBE4B-204ENST00000462658 NEXNQ0ZGT2 675 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 GRB10Q13322 594 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 MTERF2Q49AM1 385 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 GTF2IRD2BQ6EKJ0 949 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 GTF2IRD2Q86UP8 949 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 RPAP2Q8IXW5 612 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-204ENST00000462658 ST13P5Q8NFI4 369 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-204ENST00000462658 LINS1Q8NG48 757 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 PLBD2Q8NHP8 589 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 ZSWIM4Q9H7M6 989 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 ATP10DQ9P241 1426 aa9.04□□□□□ -0.96
UBE4B-204ENST00000462658 LY75O60449 1722 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 AURKAO14965 403 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 IGSF3O75054 1194 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 UBTFL1P0CB47 393 aaPredicted RBP9.03□□□□□ -0.96
UBE4B-204ENST00000462658 POMZP3Q6PJE2 187 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 SIRT2Q8IXJ6 389 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 ANKRD44Q8N8A2 993 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 MKL1Q969V6 931 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 MYD88Q99836 296 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 ERVK13-1Q9NX77 482 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 CTNND2Q9UQB3 1225 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 LAMB4A4D0S4 1761 aa9.03□□□□□ -0.96
UBE4B-204ENST00000462658 AGRPO00253 132 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 IGKV5-2P06315 115 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 GRIA2P42262 883 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 ITPK1Q13572 414 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 SF1Q15637 639 aaKnown RBP9.02□□□□□ -0.97
UBE4B-204ENST00000462658 CEP85Q6P2H3 762 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 CRACR2BQ8N4Y2 399 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-204ENST00000462658 TMEM52Q8NDY8 209 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 PIF1Q9H611 641 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 C9orf78Q9NZ63 289 aaPredicted RBP9.02□□□□□ -0.97
UBE4B-204ENST00000462658 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 LRP5O75197 1615 aa9.02□□□□□ -0.97
UBE4B-204ENST00000462658 HMMRO75330 724 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 USP2O75604 605 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 NBPF7P0C2Y1 421 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 TRHRP34981 398 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 GDNFP39905 211 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 IL6STP40189 918 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 CRKLP46109 303 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms