RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 DOCK5Q9H7D0 1870 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 M0QZ92 97 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 TBX3O15119 743 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 HBP1O60381 514 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 CD4P01730 458 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 ACTN1P12814 892 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 HOXD8P13378 290 aaPredicted RBP10.78□□□□□ -0.68
PKP4-208ENST00000462335 THPOP40225 353 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 TXKP42681 527 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 CCL23P55773 120 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 ST3GAL1Q11201 340 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 PTK7Q13308 1070 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 ZNF174Q15697 407 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 NPY5RQ15761 445 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 TTC38Q5R3I4 469 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 NCAPH2Q6IBW4 605 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
PKP4-208ENST00000462335 MFSD5Q6N075 450 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 RDM1Q8NG50 284 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 CAGE1Q8TC20 777 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 CRYGNQ8WXF5 182 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 TRIM43Q96BQ3 446 aaPredicted RBP10.78□□□□□ -0.68
PKP4-208ENST00000462335 RAB34Q9BZG1 259 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 RNPEPQ9H4A4 650 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 CEP131Q9UPN4 1083 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 EMSYQ7Z589 1322 aa10.78□□□□□ -0.68
PKP4-208ENST00000462335 HAS3O00219 553 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 LGR5O75473 907 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 PARNO95453 639 aaKnown RBP10.77□□□□□ -0.69
PKP4-208ENST00000462335 RPLP2P05387 115 aaKnown RBP10.77□□□□□ -0.69
PKP4-208ENST00000462335 TRAPPC10P48553 1259 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 GRIK4Q16099 956 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 PPP4R3CPQ6ZMV5 832 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 ERMNQ8TAM6 284 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 SNX21Q969T3 373 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 INTS4Q96HW7 963 aaKnown RBP10.77□□□□□ -0.69
PKP4-208ENST00000462335 UNC45AQ9H3U1 944 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 TBX21Q9UL17 535 aa10.77□□□□□ -0.69
PKP4-208ENST00000462335 COLQQ9Y215 455 aaPredicted RBP10.77□□□□□ -0.69
PKP4-208ENST00000462335 MYH9P35579 1960 aaKnown RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 DDX11L8A8MPP1 907 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 DHX15O43143 795 aaKnown RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 SLC37A4O43826 429 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 ATG7O95352 703 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 CCNE2O96020 404 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 FGBP02675 491 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 PDIA4P13667 645 aaKnown RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 INSRRP14616 1297 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 SELPP16109 830 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 TMOD1P28289 359 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 RFC2P35250 354 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 ZNF200P98182 395 aaPredicted RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 ORC2Q13416 577 aaPredicted RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 CUL4AQ13619 759 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 PLCB4Q15147 1175 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 RILPL1Q5EBL4 403 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 ZNF484Q5JVG2 852 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 TAF2Q6P1X5 1199 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 OTUD6AQ7L8S5 288 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 DEFB128Q7Z7B8 93 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 METTL13Q8N6R0 699 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 AFAP1L1Q8TED9 768 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 ATP8B4Q8TF62 1192 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 BBXQ8WY36 941 aaPredicted RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 GJA10Q969M2 543 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 NOC4LQ9BVI4 516 aaKnown RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
PKP4-208ENST00000462335 TUBE1Q9UJT0 475 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 CEP290O15078 2479 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
PKP4-208ENST00000462335 MKI67P46013 3256 aaKnown RBP10.75□□□□□ -0.69
PKP4-208ENST00000462335 ZBBXA8MT70 800 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 RSPH10B2B2RC85 870 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 TREHO43280 583 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 PSMD10O75832 226 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 P4HBP07237 508 aaKnown RBP10.75□□□□□ -0.69
PKP4-208ENST00000462335 PFKMP08237 780 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 RSPH10BP0C881 870 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 CSF2RAP15509 400 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 U2AF2P26368 475 aaKnown RBP eCLIP10.75□□□□□ -0.692e-7■■■■□ 20.7
PKP4-208ENST00000462335 BMP8BP34820 402 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 QARSP47897 775 aaKnown RBP10.75□□□□□ -0.69
PKP4-208ENST00000462335 DNM2P50570 870 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 PSMC5P62195 406 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 EARS2Q5JPH6 523 aaKnown RBP10.75□□□□□ -0.69
PKP4-208ENST00000462335 IER5Q5VY09 327 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 PSRC1Q6PGN9 363 aaPredicted RBP10.75□□□□□ -0.69
PKP4-208ENST00000462335 LRRC8DQ7L1W4 858 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 BRAPQ7Z569 592 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 TPH2Q8IWU9 490 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 TDHQ8IZJ6 230 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 ETNPPLQ8TBG4 499 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 LMBR1Q8WVP7 490 aa10.75□□□□□ -0.69
PKP4-208ENST00000462335 TNFRSF25Q93038 417 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms