RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 B3GNT9Q6UX72 402 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 SMAP1Q8IYB5 467 aaPredicted RBP17.93■□□□□ 0.46
ERCC3-206ENST00000462306 AFAP1L1Q8TED9 768 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 LMBR1Q8WVP7 490 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 NAP1L4Q99733 375 aaKnown RBP17.93■□□□□ 0.46
ERCC3-206ENST00000462306 KCNMB3Q9NPA1 279 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 IL23AQ9NPF7 189 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 TRIP12Q14669 1992 aaPredicted RBP17.93■□□□□ 0.46
ERCC3-206ENST00000462306 NRCAMQ92823 1304 aa17.93■□□□□ 0.46
ERCC3-206ENST00000462306 BACH1O14867 736 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 CCNT1O60563 726 aaKnown RBP17.92■□□□□ 0.46
ERCC3-206ENST00000462306 GAS7O60861 476 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 IQCF3P0C7M6 154 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 ACRP10323 421 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 GNAT1P11488 350 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 SLC26A2P50443 739 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 FXR1P51114 621 aaKnown RBP eCLIP17.92■□□□□ 0.46
ERCC3-206ENST00000462306 PPFIA1Q13136 1202 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 SAFBQ15424 915 aaKnown RBP eCLIP17.92■□□□□ 0.46
ERCC3-206ENST00000462306 LRIT3Q3SXY7 679 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 TMEM240Q5SV17 173 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 SWSAP1Q6NVH7 229 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 CCDC155Q8N6L0 562 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 RETREG2Q8NC44 543 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.461e-6■■□□□ 12.3
ERCC3-206ENST00000462306 TEKT3Q9BXF9 490 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 UNC45AQ9H3U1 944 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 ZNF302Q9NR11 478 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 PCDHA10Q9Y5I2 948 aa17.92■□□□□ 0.46
ERCC3-206ENST00000462306 WDR64B1ANS9 1081 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 WNT7AO00755 349 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 PSAPP07602 524 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 CKBP12277 381 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 INSRRP14616 1297 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 SELPP16109 830 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 ATP4AP20648 1035 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 GRIK4Q16099 956 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 MARCH8Q5T0T0 291 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 FAM160B1Q5W0V3 765 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 TRAF7Q6Q0C0 670 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 HAS1Q92839 578 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
ERCC3-206ENST00000462306 DISC1Q9NRI5 854 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 TCEAL9Q9UHQ7 104 aa17.91■□□□□ 0.46
ERCC3-206ENST00000462306 MAFBQ9Y5Q3 323 aaPredicted RBP17.91■□□□□ 0.46
ERCC3-206ENST00000462306 POTEB3A0JP26 581 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 MBLAC1A4D2B0 266 aaPredicted RBP17.9■□□□□ 0.46
ERCC3-206ENST00000462306 SOX1O00570 391 aaPredicted RBP17.9■□□□□ 0.46
ERCC3-206ENST00000462306 TBX3O15119 743 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 GJB2P29033 226 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 CUL4AQ13619 759 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 GPNMBQ14956 572 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 PDXDC2PQ6P474 469 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 POTEBQ6S5H4 581 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 ZNF365Q70YC5 407 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 FAM20AQ96MK3 541 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
ERCC3-206ENST00000462306 RRN3P2A6NIE6 340 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 KIF28PB7ZC32 967 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 CHMP2AO43633 222 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 SFNP31947 248 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 RFC2P35250 354 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 JAK3P52333 1124 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 ZNF618Q5T7W0 954 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 RASIP1Q5U651 963 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 PSRC1Q6PGN9 363 aaPredicted RBP17.89■□□□□ 0.45
ERCC3-206ENST00000462306 LRRC8DQ7L1W4 858 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 RPUSD2Q8IZ73 545 aaKnown RBP17.89■□□□□ 0.45
ERCC3-206ENST00000462306 ATP8B4Q8TF62 1192 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 GABBR1Q9UBS5 961 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 VAV3Q9UKW4 847 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 KIF3AQ9Y496 699 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 SAMM50Q9Y512 469 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 IGSF9BQ9UPX0 1349 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 LAMA3Q16787 3333 aa17.89■□□□□ 0.45
ERCC3-206ENST00000462306 SCN5AQ14524 2016 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 U2AF2P26368 475 aaKnown RBP eCLIP17.88■□□□□ 0.451e-7■□□□□ 8.7
ERCC3-206ENST00000462306 THPOP40225 353 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 IGBP1P78318 339 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 MBTPS1Q14703 1052 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 RUFY4Q6ZNE9 571 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 MIER3Q7Z3K6 550 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 DEFB128Q7Z7B8 93 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 NOSTRINQ8IVI9 506 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 RDM1Q8NG50 284 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 TRAPPC12Q8WVT3 735 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 TNPO1Q92973 898 aaKnown RBP17.88■□□□□ 0.45
ERCC3-206ENST00000462306 ZBTB10Q96DT7 871 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 RNPC3Q96LT9 517 aaKnown RBP17.88■□□□□ 0.45
ERCC3-206ENST00000462306 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
ERCC3-206ENST00000462306 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.88■□□□□ 0.45
ERCC3-206ENST00000462306 ZBTB42B2RXF5 422 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 ZNF862O60290 1169 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 HBP1O60381 514 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 NBNO60934 754 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 CAND2O75155 1236 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 FGBP02675 491 aa17.87■□□□□ 0.45
ERCC3-206ENST00000462306 PFKMP08237 780 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms