RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 NSUN3Q9H649 340 aaKnown RBP6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 TMX2Q9Y320 296 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 RIPK3Q9Y572 518 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 SPTBN2O15020 2390 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 MYO10Q9HD67 2058 aa6.97□□□□□ -1.29
SMARCC1-204ENST00000462198 CEP250Q9BV73 2442 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 FSD2A1L4K1 749 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 H3BNC9 293 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 WDR46O15213 610 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 PRKAB2O43741 272 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 DKK1O94907 266 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 POLR3DP05423 398 aaPredicted RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 SMPD1P17405 629 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 SCNN1AP37088 669 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 MCCD1P59942 119 aaPredicted RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 CLDN10P78369 228 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 SLC20A2Q08357 652 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 SMAD4Q13485 552 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 BFSP2Q13515 415 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 GPNMBQ14956 572 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 ST3GAL2Q16842 350 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 PTPRNQ16849 979 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 EPC2Q52LR7 807 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 FAM47CQ5HY64 1035 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 IQSEC1Q6DN90 963 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 SNRNP48Q6IEG0 339 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 REPS2Q8NFH8 660 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 FGD4Q96M96 766 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 RIPOR3Q96MK2 946 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 OCSTAMPQ9BR26 566 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 GTPBP4Q9BZE4 634 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 NACAP1Q9BZK3 213 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 VCPKMTQ9H867 229 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 ATP8A2Q9NTI2 1148 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 MCM9Q9NXL9 1143 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 PPP1R9AQ9ULJ8 1098 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 ISY1Q9ULR0 285 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 INSL6Q9Y581 213 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 DNAH14Q0VDD8 3507 aa6.96□□□□□ -1.3
SMARCC1-204ENST00000462198 ZFHX4Q86UP3 3567 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 ABHD14A-ACY1A0A1B0GW23 586 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 LOC730098B7Z3J9 87 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 ACTN4O43707 911 aaKnown RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CDC45O75419 566 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 LETM1O95202 739 aaPredicted RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 PDGFBP01127 241 aaPredicted RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 SNRPBP14678 240 aaKnown RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CHMLP26374 656 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 TDO2P48775 406 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CNTN2Q02246 1040 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 KCNH2Q12809 1159 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 OCLNQ16625 522 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 MAP7D1Q3KQU3 841 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 TMEM63BQ5T3F8 832 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 MCTP2Q6DN12 878 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CNKSR3Q6P9H4 555 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 RNF19BQ6ZMZ0 732 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CPXCR1Q8N123 301 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 SIX5Q8N196 739 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 ANKRD35Q8N283 1001 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 PPP1R13LQ8WUF5 828 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 SAMD11Q96NU1 681 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 TEX13BQ9BXU2 312 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 IGFLR1Q9H665 355 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 DCP1AQ9NPI6 582 aaPredicted RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 PDGFCQ9NRA1 345 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CD207Q9UJ71 328 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 Q9Y3F1 56 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 FASNP49327 2511 aaKnown RBP6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 MYH4Q9Y623 1939 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 CCDC171Q6TFL3 1326 aa6.95□□□□□ -1.3
SMARCC1-204ENST00000462198 GSG1L2A8MUP6 293 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 MINDY4BA8MYZ0 360 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 CLSTN1O94985 981 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 MYL3P08590 195 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 RPIAP49247 311 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 GABPAQ06546 454 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 DMTNQ08495 405 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 HYAL1Q12794 435 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 IKBKEQ14164 716 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 CBX2Q14781 532 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 EML3Q32P44 896 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 VPS53Q5VIR6 699 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 TAPT1Q6NXT6 567 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 KIAA1211Q6ZU35 1233 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 TMEM179Q6ZVK1 233 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 ZNF589Q86UQ0 364 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 KIAA2013Q8IYS2 634 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 IFNL3Q8IZI9 196 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 CYP4X1Q8N118 509 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms