RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 MAPK8IP1Q9UQF2 711 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 AFG3L2Q9Y4W6 797 aa13.77□□□□□ -0.21
COL4A6-204ENST00000461897 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 C19orf81C9J6K1 198 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 KRT86O43790 486 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 HSD17B4P51659 736 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 SLC20A2Q08357 652 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 MCM6Q14566 821 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 GPR162Q16538 588 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 NCAPH2Q6IBW4 605 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-204ENST00000461897 CPXCR1Q8N123 301 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 SNX29Q8TEQ0 813 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 CCDC47Q96A33 483 aaKnown RBP13.76□□□□□ -0.21
COL4A6-204ENST00000461897 ATG4CQ96DT6 458 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 TSPYL1Q9H0U9 437 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 ACBD3Q9H3P7 528 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 SAR1BQ9Y6B6 198 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 SCN4AP35499 1836 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 VWA5AO00534 786 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 TBX3O15119 743 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 MARCH6O60337 910 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 EPHX2P34913 555 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 ACTN2P35609 894 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 GHRHRQ02643 423 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 SPIRE1Q08AE8 756 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 ZSCAN26Q16670 478 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 CCDC122Q5T0U0 273 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 FOXR2Q6PJQ5 311 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 ZNF572Q7Z3I7 529 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-204ENST00000461897 SLFN12Q8IYM2 578 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 BLOC1S4Q9NUP1 217 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 TRIM10Q9UDY6 481 aa13.76□□□□□ -0.21
COL4A6-204ENST00000461897 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
COL4A6-204ENST00000461897 GLTPD2A6NH11 291 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 MSH4O15457 936 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 ALAS1P13196 640 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 UBXN2AP68543 259 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 ITIH3Q06033 890 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 ECM1Q16610 540 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 MAP9Q49MG5 647 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 KRT79Q5XKE5 535 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 REPS2Q8NFH8 660 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 RUBCNQ92622 972 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 TSGA10Q9BZW7 698 aa13.75□□□□□ -0.21
COL4A6-204ENST00000461897 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
COL4A6-204ENST00000461897 B4DLN1 442 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 ATP1A1P05023 1023 aaKnown RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 STAT3P40763 770 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 AMPD3Q01432 767 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 JAKMIP2Q96AA8 810 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 SUGCTQ9HAC7 445 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 HOMER2Q9NSB8 354 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 CWC15Q9P013 229 aaKnown RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 STK17AQ9UEE5 414 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 ADAMTS5Q9UNA0 930 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 ZBED4O75132 1171 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 FDX1P10109 184 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 TRIM21P19474 475 aaKnown RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 VAV2P52735 878 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 TBC1D8BQ0IIM8 1120 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 SH3D19Q5HYK7 790 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 HYIQ5T013 277 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 ANKRD40Q6AI12 368 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 CNNM4Q6P4Q7 775 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 FAM20AQ96MK3 541 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 MMS19Q96T76 1030 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 NHEJ1Q9H9Q4 299 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-204ENST00000461897 AGPAT5Q9NUQ2 364 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 VPS18Q9P253 973 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 LOC285556D6RIA3 1793 aa13.74□□□□□ -0.21
COL4A6-204ENST00000461897 RPTORQ8N122 1335 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 LCA5LO95447 670 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 IVLP07476 585 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 PRLRP16471 622 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 DSG3P32926 999 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 ZNF76P36508 570 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 LMAN1P49257 510 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 GYS2P54840 703 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 PDE4DQ08499 809 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 RAD51AP2Q09MP3 1159 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 STK4Q13043 487 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 CENPPQ6IPU0 288 aa13.73□□□□□ -0.21
COL4A6-204ENST00000461897 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms