RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
SF3A3-203ENST00000461869 TGFB3P10600 412 aa17.69■□□□□ 0.42
SF3A3-203ENST00000461869 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
SF3A3-203ENST00000461869 SP2Q02086 613 aa17.69■□□□□ 0.42
SF3A3-203ENST00000461869 PTPROQ16827 1216 aa17.69■□□□□ 0.42
SF3A3-203ENST00000461869 SAMD3Q8N6K7 520 aa17.69■□□□□ 0.42
SF3A3-203ENST00000461869 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
SF3A3-203ENST00000461869 ATP6V0A1Q93050 837 aa17.69■□□□□ 0.42
SF3A3-203ENST00000461869 MRPL38Q96DV4 380 aaKnown RBP17.69■□□□□ 0.42
SF3A3-203ENST00000461869 ZFP91Q96JP5 570 aaPredicted RBP17.69■□□□□ 0.42
SF3A3-203ENST00000461869 SLC26A6Q9BXS9 759 aa17.69■□□□□ 0.42
SF3A3-203ENST00000461869 SIP14410 1827 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 H3BRB1 525 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 IL9P15248 144 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 UBA1P22314 1058 aaKnown RBP17.68■□□□□ 0.42
SF3A3-203ENST00000461869 CCND2P30279 289 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 SSTR3P32745 418 aaPredicted RBP17.68■□□□□ 0.42
SF3A3-203ENST00000461869 PKP1Q13835 747 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 EPC2Q52LR7 807 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 PTCRAQ6ISU1 281 aaPredicted RBP17.68■□□□□ 0.42
SF3A3-203ENST00000461869 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 SEPT8Q92599 483 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
SF3A3-203ENST00000461869 MTMR8Q96EF0 704 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 SAMD11Q96NU1 681 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 YME1L1Q96TA2 773 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 TUT1Q9H6E5 874 aaKnown RBP17.68■□□□□ 0.42
SF3A3-203ENST00000461869 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 BDP1A6H8Y1 2624 aa17.68■□□□□ 0.42
SF3A3-203ENST00000461869 MYH7BA7E2Y1 1941 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
SF3A3-203ENST00000461869 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 SMIM10L2AP0DMW4 78 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 SMIM10L2BP0DMW5 78 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 FDPSP14324 419 aaKnown RBP17.67■□□□□ 0.42
SF3A3-203ENST00000461869 XBP1P17861 261 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 SMARCA1P28370 1054 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 TRIM29Q14134 588 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 PUS10Q3MIT2 529 aaKnown RBP17.67■□□□□ 0.42
SF3A3-203ENST00000461869 FCHSD1Q86WN1 690 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
SF3A3-203ENST00000461869 PHKBQ93100 1093 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 CNTNAP5Q8WYK1 1306 aa17.67■□□□□ 0.42
SF3A3-203ENST00000461869 MYH6P13533 1939 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 PALM3A6NDB9 673 aaPredicted RBP17.66■□□□□ 0.42
SF3A3-203ENST00000461869 GRXCR2A6NFK2 248 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 PRR33A8MZF0 331 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 TREHO43280 583 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
SF3A3-203ENST00000461869 UPP2O95045 317 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 PLEKHA8P1O95397 391 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 F13A1P00488 732 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 LGALS2P05162 132 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 HOXC8P31273 242 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 TRAF1Q13077 416 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 GPM6BQ13491 265 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 CLEC17AQ6ZS10 378 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 SPZ1Q9BXG8 430 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 RNPEPQ9H4A4 650 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
SF3A3-203ENST00000461869 H3BNC9 293 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 H3BQ06 376 aaPredicted RBP17.65■□□□□ 0.42
SF3A3-203ENST00000461869 NOP56O00567 594 aaKnown RBP17.65■□□□□ 0.42
SF3A3-203ENST00000461869 CAND2O75155 1236 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 CTSHP09668 335 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 FUT2Q10981 343 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 TIGD5Q53EQ6 642 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 TMEM192Q8IY95 271 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 NEK9Q8TD19 979 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 OSBPL7Q9BZF2 842 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 ZSCAN16Q9H4T2 348 aaPredicted RBP17.65■□□□□ 0.42
SF3A3-203ENST00000461869 BCAS3Q9H6U6 928 aa17.65■□□□□ 0.42
SF3A3-203ENST00000461869 GOLGA6L22H0YM25 854 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 GNAT1P11488 350 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 ALADP13716 330 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 PTMSP20962 102 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 TCEAL5Q5H9L2 206 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 EP400NLQ6ZTU2 488 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 FAM177A1Q8N128 213 aaPredicted RBP17.64■□□□□ 0.41
SF3A3-203ENST00000461869 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
SF3A3-203ENST00000461869 FBXO18Q8NFZ0 1043 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 PIGSQ96S52 555 aa17.64■□□□□ 0.41
SF3A3-203ENST00000461869 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.63■□□□□ 0.41
SF3A3-203ENST00000461869 NEDD9Q14511 834 aa17.63■□□□□ 0.41
SF3A3-203ENST00000461869 CCDC82Q8N4S0 544 aa17.63■□□□□ 0.41
SF3A3-203ENST00000461869 PABPC5Q96DU9 382 aaKnown RBP17.63■□□□□ 0.41
SF3A3-203ENST00000461869 UIMC1Q96RL1 719 aa17.63■□□□□ 0.41
SF3A3-203ENST00000461869 IFIH1Q9BYX4 1025 aaKnown RBP17.63■□□□□ 0.41
SF3A3-203ENST00000461869 RIOX1Q9H6W3 641 aa17.63■□□□□ 0.41
SF3A3-203ENST00000461869 SETD4Q9NVD3 440 aa17.63■□□□□ 0.41
SF3A3-203ENST00000461869 DDX11L8A8MPP1 907 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 DTNBO60941 627 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 PPFIA3O75145 1194 aa17.62■□□□□ 0.41
SF3A3-203ENST00000461869 STAM2O75886 525 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms