RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CRYGNQ8WXF5 182 aa10.47□□□□□ -0.73
BRCA1-207ENST00000461798 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
BRCA1-207ENST00000461798 RAD9AQ99638 391 aa10.47□□□□□ -0.73
BRCA1-207ENST00000461798 ANO3Q9BYT9 981 aa10.47□□□□□ -0.73
BRCA1-207ENST00000461798 ZMYND12Q9H0C1 365 aa10.47□□□□□ -0.73
BRCA1-207ENST00000461798 SMARCAD1Q9H4L7 1026 aa10.47□□□□□ -0.73
BRCA1-207ENST00000461798 ERAP1Q9NZ08 941 aa10.47□□□□□ -0.73
BRCA1-207ENST00000461798 TRIP12Q14669 1992 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 MYO9BQ13459 2157 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 MBLAC1A4D2B0 266 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 ARHGEF15O94989 841 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 ATG7O95352 703 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 CYP3A4P08684 503 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 ARP10275 920 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 SCG2P13521 617 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 IGFBP4P22692 258 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 DEFB103AP81534 67 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 FGD1P98174 961 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 SP4Q02446 784 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 APOBRQ0VD83 1088 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 NTRK3Q16288 839 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 PKN1Q16512 942 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 PLPPR4Q7Z2D5 763 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 ATXN2LQ8WWM7 1075 aaKnown RBP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 SEPT8Q92599 483 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 BRF1Q92994 677 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 PCYT2Q99447 389 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
BRCA1-207ENST00000461798 AGO4Q9HCK5 861 aaKnown RBP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 JPH1Q9HDC5 661 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-207ENST00000461798 TANC1Q9C0D5 1861 aa10.46□□□□□ -0.74
BRCA1-207ENST00000461798 CDH23Q9H251 3354 aa10.46□□□□□ -0.74
BRCA1-207ENST00000461798 IGKV6D-21A0A0A0MT36 114 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 EPOPA6NHQ4 379 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 RRN3P2A6NIE6 340 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 RPLP2P05387 115 aaKnown RBP10.45□□□□□ -0.74
BRCA1-207ENST00000461798 HOXB1P14653 301 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-207ENST00000461798 ERVK-21P61565 698 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 HTRA4P83105 476 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-207ENST00000461798 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 PPFIA1Q13136 1202 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 MARCH8Q5T0T0 291 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.45□□□□□ -0.74
BRCA1-207ENST00000461798 CCDC12Q8WUD4 166 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-207ENST00000461798 GLG1Q92896 1179 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 TNPO1Q92973 898 aaKnown RBP10.45□□□□□ -0.74
BRCA1-207ENST00000461798 SDF4Q9BRK5 362 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 ZBED2Q9BTP6 218 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 OSBPL7Q9BZF2 842 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 TM6SF1Q9BZW5 370 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 TMEM260Q9NX78 707 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 LMCD1Q9NZU5 365 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 SLC9A2Q9UBY0 812 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 MTCH2Q9Y6C9 303 aa10.45□□□□□ -0.74
BRCA1-207ENST00000461798 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 IGLV3-22A0A075B6J6 115 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 LCHNA4D1U4 455 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 RFXAPO00287 272 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 DHX15O43143 795 aaKnown RBP10.44□□□□□ -0.74
BRCA1-207ENST00000461798 LPXNO60711 386 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 CHRNA1P02708 482 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 AMHP03971 560 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 INSRRP14616 1297 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 IFNAR1P17181 557 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 GNA11P29992 359 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
BRCA1-207ENST00000461798 SLC26A2P50443 739 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 ACTR2P61160 394 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 MGAT3Q09327 533 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 ITGB3BPQ13352 177 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-207ENST00000461798 GRIK4Q16099 956 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 RUFY3Q7L099 469 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 TMCO2Q7Z6W1 182 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-207ENST00000461798 RSPH3Q86UC2 560 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 ARNTL2Q8WYA1 636 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 APBB2Q92870 758 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 TOP1MTQ969P6 601 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-207ENST00000461798 C6orf50Q9HD87 102 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 PRDM6Q9NQX0 595 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 PKD2L1Q9P0L9 805 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 NAP1L2Q9ULW6 460 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-207ENST00000461798 INSL6Q9Y581 213 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 SQORQ9Y6N5 450 aa10.44□□□□□ -0.74
BRCA1-207ENST00000461798 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 LINC01553A4QN01 128 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 FAM86B1E9PN63 330 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 GTPBP6O43824 516 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 CTSHP09668 335 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 FAM86B2P0C5J1 330 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 CIITAP33076 1130 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 ZNF76P36508 570 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 STAT5BP51692 787 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 MRPS5P82675 430 aaKnown RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 GRB10Q13322 594 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms