RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PRKCAP17252 672 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 FNTBP49356 437 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 GALK1P51570 392 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 NEK2P51955 445 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 KRT85P78386 507 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 STEAP3Q658P3 488 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 OLFML2BQ68BL8 750 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 NME9Q86XW9 330 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 NOSTRINQ8IVI9 506 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 TTLL11Q8NHH1 800 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.1□□□□□ -1.75
HDAC6-212ENST00000461608 DPF3Q92784 378 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 MTMR8Q96EF0 704 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 KCNC2Q96PR1 638 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 ASPSCR1Q9BZE9 553 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 SMOC1Q9H4F8 434 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 SMURF1Q9HCE7 757 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 ACSS2Q9NR19 701 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 THG1LQ9NWX6 298 aaKnown RBP4.1□□□□□ -1.75
HDAC6-212ENST00000461608 DSEQ9UL01 958 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 ATP23Q9Y6H3 246 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 WASHC2AQ641Q2 1341 aa4.1□□□□□ -1.75
HDAC6-212ENST00000461608 MYOCOSA0A1B0GUC4 107 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CYBBP04839 570 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 GLI4P10075 376 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 PNLIPP16233 465 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 ATP2A2P16615 1042 aaKnown RBP4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CD40P25942 277 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 SDHAP31040 664 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 LSP1P33241 339 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 EPHA5P54756 1037 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 DLG4P78352 724 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CYP4F8P98187 520 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 ITKQ08881 620 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 MTMR1Q13613 665 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 FAM50AQ14320 339 aaKnown RBP4.09□□□□□ -1.75
HDAC6-212ENST00000461608 SLC9A5Q14940 896 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 NR1I3Q14994 352 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 TTF1Q15361 905 aaPredicted RBP4.09□□□□□ -1.75
HDAC6-212ENST00000461608 DDB1Q16531 1140 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 SYDE2Q5VT97 1194 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CREB3L3Q68CJ9 461 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CC2D1AQ6P1N0 951 aaPredicted RBP4.09□□□□□ -1.75
HDAC6-212ENST00000461608 ARHGAP36Q6ZRI8 547 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 KCTD1Q719H9 257 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 NLRX1Q86UT6 975 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 SP8Q8IXZ3 490 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 NXPE1Q8N323 547 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CNTD1Q8N815 330 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 KIAA1958Q8N8K9 716 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CHTF18Q8WVB6 975 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 SLC5A5Q92911 643 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CHMP4CQ96CF2 233 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 PEX11GQ96HA9 241 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 GPR101Q96P66 508 aaPredicted RBP4.09□□□□□ -1.75
HDAC6-212ENST00000461608 CAMKK2Q96RR4 588 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 KCNJ15Q99712 375 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 JAM3Q9BX67 310 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 TNFRSF12AQ9NP84 129 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 KCNH7Q9NS40 1196 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 OXSMQ9NWU1 459 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 MYOTQ9UBF9 498 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 SRRDQ9UH36 339 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 GPR160Q9UJ42 338 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 KCTD3Q9Y597 815 aa4.09□□□□□ -1.75
HDAC6-212ENST00000461608 PEX10O60683 326 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 KATNA1O75449 491 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 FBXO21O94952 628 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 CFBP00751 764 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 U2AF1L5P0DN76 240 aaPredicted RBP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 KRT15P19012 456 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 KIF11P52732 1056 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 JAM2P57087 298 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 HERVK_113P62684 666 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 U2AF1Q01081 240 aaKnown RBP eCLIP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 MVKQ03426 396 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 PLP2Q04941 152 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 LRRC32Q14392 662 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 PUM1Q14671 1186 aaKnown RBP eCLIP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 SKOR2Q2VWA4 1001 aaPredicted RBP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 BICRALQ6AI39 1079 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 PAQR3Q6TCH7 311 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 HDGFL2Q7Z4V5 671 aaPredicted RBP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 ZNF605Q86T29 641 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 ZBTB46Q86UZ6 589 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 IRF2BP1Q8IU81 584 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 PIP4K2CQ8TBX8 421 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 SSH1Q8WYL5 1049 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 E2F7Q96AV8 911 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 SLC13A1Q9BZW2 595 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 MCOLN1Q9GZU1 580 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 SPTLC3Q9NUV7 552 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 GEMIN8Q9NWZ8 242 aaKnown RBP4.08□□□□□ -1.76
HDAC6-212ENST00000461608 CHPF2Q9P2E5 772 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 PCDHB4Q9Y5E5 795 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 B3GALT1Q9Y5Z6 326 aa4.08□□□□□ -1.76
HDAC6-212ENST00000461608 SHTN1A0MZ66 631 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 NOTOA8MTQ0 251 aa4.07□□□□□ -1.76
HDAC6-212ENST00000461608 HRKO00198 91 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms