RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 GALNT17Q6IS24 598 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 FAM177A1Q8N128 213 aaPredicted RBP17.47■□□□□ 0.39
VARS-219ENST00000461328 UIMC1Q96RL1 719 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 PRDM12Q9H4Q4 367 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
VARS-219ENST00000461328 KIF28PB7ZC32 967 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 EFCAB14O75071 495 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 LGR5O75473 907 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 WDR5P61964 334 aaKnown RBP17.46■□□□□ 0.39
VARS-219ENST00000461328 ADAM17P78536 824 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 ITGB3BPQ13352 177 aaPredicted RBP17.46■□□□□ 0.39
VARS-219ENST00000461328 IKBKEQ14164 716 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 GRIK4Q16099 956 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 PRR16Q569H4 304 aa17.46■□□□□ 0.39
VARS-219ENST00000461328 IPO5O00410 1097 aaKnown RBP17.45■□□□□ 0.38
VARS-219ENST00000461328 CTDNEP1O95476 244 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 CA3P07451 260 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 FOSBP53539 338 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 TCTN1Q2MV58 587 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 TBCKQ8TEA7 893 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 PCYT2Q99447 389 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 TUBE1Q9UJT0 475 aa17.45■□□□□ 0.38
VARS-219ENST00000461328 IGLV3-22A0A075B6J6 115 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 CCDC194A0A1B0GVG4 234 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 BACH1O14867 736 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 TLL1O43897 1013 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 STAT5BP51692 787 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 IGBP1P78318 339 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 DEFB103AP81534 67 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 NONOQ15233 471 aaKnown RBP eCLIP17.44■□□□□ 0.38
VARS-219ENST00000461328 TAF2Q6P1X5 1199 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 DBF4BQ8NFT6 615 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
VARS-219ENST00000461328 ZBED2Q9BTP6 218 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 TRPC6Q9Y210 931 aa17.44■□□□□ 0.38
VARS-219ENST00000461328 CHD9Q3L8U1 2897 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 RBAK-RBAKDNI3L0D1 243 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 JAK2O60674 1132 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 CIITAP33076 1130 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 TRIM29Q14134 588 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 PLEKHG4Q58EX7 1191 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 RUFY4Q6ZNE9 571 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 PLPPR4Q7Z2D5 763 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 TMCO2Q7Z6W1 182 aaPredicted RBP17.43■□□□□ 0.38
VARS-219ENST00000461328 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.43■□□□□ 0.38
VARS-219ENST00000461328 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
VARS-219ENST00000461328 SEPT8Q92599 483 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 TBC1D22BQ9NU19 505 aa17.43■□□□□ 0.38
VARS-219ENST00000461328 RRN3P2A6NIE6 340 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 CCNE2O96020 404 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 INSRRP14616 1297 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 IGFBP4P22692 258 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
VARS-219ENST00000461328 USP11P51784 963 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 RABEP1Q15276 862 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 NPY5RQ15761 445 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 FAM160B1Q5W0V3 765 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 MIS18BP1Q6P0N0 1132 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 CCDC83Q8IWF9 413 aa17.42■□□□□ 0.38
VARS-219ENST00000461328 MBLAC1A4D2B0 266 aaPredicted RBP17.41■□□□□ 0.38
VARS-219ENST00000461328 ATG7O95352 703 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 AMHP03971 560 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 SLC26A2P50443 739 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 KRT76Q01546 638 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 PLCB4Q15147 1175 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 INF2Q27J81 1249 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 FAM26DQ5JW98 314 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 MARCH8Q5T0T0 291 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.41■□□□□ 0.386e-7■■□□□ 13.4
VARS-219ENST00000461328 RPAINQ86UA6 219 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 DNAJB3Q8WWF6 145 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 CERS4Q9HA82 394 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 SAMM50Q9Y512 469 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 KAT6AQ92794 2004 aa17.41■□□□□ 0.38
VARS-219ENST00000461328 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 M0R2N6 131 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 DHX15O43143 795 aaKnown RBP17.4■□□□□ 0.38
VARS-219ENST00000461328 ST18O60284 1047 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 GAS7O60861 476 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 GJB5O95377 273 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 TDP2O95551 362 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 CHRNA1P02708 482 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 KRT2P35908 639 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 TAP1Q03518 808 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 ADGRE1Q14246 886 aa17.4■□□□□ 0.38
VARS-219ENST00000461328 LETM2Q2VYF4 491 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms