RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 UBAC1Q9BSL1 405 aa19.9■□□□□ 0.78
TOP3A-202ENST00000461127 FTHL17Q9BXU8 183 aa19.9■□□□□ 0.78
TOP3A-202ENST00000461127 TLR9Q9NR96 1032 aa19.9■□□□□ 0.78
TOP3A-202ENST00000461127 SPATA31C2B4DYI2 1134 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 PPP1R11O60927 126 aaPredicted RBP19.89■□□□□ 0.77
TOP3A-202ENST00000461127 GLP2RO95838 553 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 RPLP2P05387 115 aaKnown RBP19.89■□□□□ 0.77
TOP3A-202ENST00000461127 SP4Q02446 784 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 MGAT3Q09327 533 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 PPFIA1Q13136 1202 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 PAN2Q504Q3 1202 aaKnown RBP19.89■□□□□ 0.77
TOP3A-202ENST00000461127 RUFY4Q6ZNE9 571 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 STAG2Q8N3U4 1231 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 MTMR8Q96EF0 704 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 TUBE1Q9UJT0 475 aa19.89■□□□□ 0.77
TOP3A-202ENST00000461127 FAM186AA6NE01 2351 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 PROB1E7EW31 1015 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 SRGAP2BP0DMP2 458 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 PDE1AP54750 535 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 IFIT1BQ5T764 474 aaKnown RBP19.88■□□□□ 0.77
TOP3A-202ENST00000461127 HOMER1Q86YM7 354 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 GIMAP8Q8ND71 665 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-202ENST00000461127 NEK1Q96PY6 1258 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 CDY2AQ9Y6F7 541 aa19.88■□□□□ 0.77
TOP3A-202ENST00000461127 MRPS9P82933 396 aaKnown RBP19.87■□□□□ 0.77
TOP3A-202ENST00000461127 UBE3AQ05086 875 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 DNAJB3Q8WWF6 145 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 SUSD6Q92537 303 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 RIPOR3Q96MK2 946 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 CDCA3Q99618 268 aaPredicted RBP19.87■□□□□ 0.77
TOP3A-202ENST00000461127 SENP7Q9BQF6 1050 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 KRT23Q9C075 422 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 RTEL1Q9NZ71 1219 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 PCDHB12Q9Y5F1 795 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 DOCK5Q9H7D0 1870 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 KIAA1671Q9BY89 1806 aa19.87■□□□□ 0.77
TOP3A-202ENST00000461127 GALR2O43603 387 aaPredicted RBP19.86■□□□□ 0.77
TOP3A-202ENST00000461127 PPFIA3O75145 1194 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 CD52P31358 61 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 MRPS6P82932 125 aaKnown RBP19.86■□□□□ 0.77
TOP3A-202ENST00000461127 GRIK4Q16099 956 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 IER5Q5VY09 327 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 ERMP1Q7Z2K6 904 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 AAASQ9NRG9 546 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 LRFN2Q9ULH4 789 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 PCDHB15Q9Y5E8 787 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 SQORQ9Y6N5 450 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 PLXNA3P51805 1871 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 LAMA4Q16363 1823 aa19.86■□□□□ 0.77
TOP3A-202ENST00000461127 M0QZ92 97 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 PER2O15055 1255 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 TCF7P36402 384 aaPredicted RBP19.85■□□□□ 0.77
TOP3A-202ENST00000461127 SEMA3FQ13275 785 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 SPOUT1Q5T280 376 aaKnown RBP19.85■□□□□ 0.77
TOP3A-202ENST00000461127 LINC01599Q8WXQ3 324 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 CNNM2Q9H8M5 875 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 AGO3Q9H9G7 860 aaKnown RBP19.85■□□□□ 0.77
TOP3A-202ENST00000461127 ERAP1Q9NZ08 941 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 MAD2L2Q9UI95 211 aa19.85■□□□□ 0.77
TOP3A-202ENST00000461127 FRMPD4Q14CM0 1322 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 MBLAC1A4D2B0 266 aaPredicted RBP19.84■□□□□ 0.77
TOP3A-202ENST00000461127 SCG2P13521 617 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 IMMTQ16891 758 aaKnown RBP19.84■□□□□ 0.77
TOP3A-202ENST00000461127 PDE12Q6L8Q7 609 aaKnown RBP19.84■□□□□ 0.77
TOP3A-202ENST00000461127 ASCL5Q7RTU5 278 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 NLRX1Q86UT6 975 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 CRIPAKQ8N1N5 446 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 ATP8B4Q8TF62 1192 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 RILPL2Q969X0 211 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 PIGSQ96S52 555 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 PCDHGC5Q9Y5F6 944 aa19.84■□□□□ 0.77
TOP3A-202ENST00000461127 CACNA1AO00555 2505 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 PALM3A6NDB9 673 aaPredicted RBP19.83■□□□□ 0.77
TOP3A-202ENST00000461127 PRR23AA6NEV1 266 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 MARK3P27448 753 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 NBL1P41271 181 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 PAK2Q13177 524 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 XRRA1Q6P2D8 792 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 RTN4RL1Q86UN2 441 aaPredicted RBP19.83■□□□□ 0.77
TOP3A-202ENST00000461127 UBALD2Q8IYN6 164 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 GLG1Q92896 1179 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 CCDC136Q96JN2 1154 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 RNF216Q9NWF9 866 aaPredicted RBP19.83■□□□□ 0.77
TOP3A-202ENST00000461127 NR2E1Q9Y466 385 aa19.83■□□□□ 0.77
TOP3A-202ENST00000461127 PLXNA4Q9HCM2 1894 aa19.83■□□□□ 0.76
TOP3A-202ENST00000461127 MYO15AQ9UKN7 3530 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 PNMA6FA0A0J9YX94 578 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 RRN3P2A6NIE6 340 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 PDGFBP01127 241 aaPredicted RBP19.82■□□□□ 0.76
TOP3A-202ENST00000461127 DUSP6Q16828 381 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 SEPT1Q8WYJ6 367 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 FAM49AQ9H0Q0 323 aaPredicted RBP19.82■□□□□ 0.76
TOP3A-202ENST00000461127 SMARCAD1Q9H4L7 1026 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 RIOX1Q9H6W3 641 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 PADI3Q9ULW8 664 aa19.82■□□□□ 0.76
TOP3A-202ENST00000461127 TELO2Q9Y4R8 837 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms