RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 IL31RAQ8NI17 732 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 NEK9Q8TD19 979 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 SP7Q8TDD2 431 aaPredicted RBP16.83■□□□□ 0.28
NCK1-202ENST00000460960 PIEZO1Q92508 2521 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 GPKOWQ92917 476 aaPredicted RBP eCLIP16.83■□□□□ 0.28
NCK1-202ENST00000460960 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
NCK1-202ENST00000460960 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.28
NCK1-202ENST00000460960 NSUN3Q9H649 340 aaKnown RBP16.83■□□□□ 0.28
NCK1-202ENST00000460960 PCDHA1Q9Y5I3 950 aa16.83■□□□□ 0.28
NCK1-202ENST00000460960 V9GY48 417 aaPredicted RBP16.83■□□□□ 0.28
NCK1-202ENST00000460960 MYO7AQ13402 2215 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 H3BNC9 293 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 H3BRB1 525 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 TREHO43280 583 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 RGS20O76081 388 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 HOXD8P13378 290 aaPredicted RBP16.82■□□□□ 0.28
NCK1-202ENST00000460960 CCND2P30279 289 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 SP2Q02086 613 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 PGM5Q15124 567 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 CLUL1Q15846 466 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
NCK1-202ENST00000460960 C16orf70Q9BSU1 422 aa16.82■□□□□ 0.28
NCK1-202ENST00000460960 TUT1Q9H6E5 874 aaKnown RBP16.82■□□□□ 0.28
NCK1-202ENST00000460960 ADAMTS3O15072 1205 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 LGALS2P05162 132 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 CTNNB1P35222 781 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 MRE11P49959 708 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 ANKRD1Q15327 319 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 PKN1Q16512 942 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 WWC2Q6AWC2 1192 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 RPAINQ86UA6 219 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 OSBPL7Q9BZF2 842 aa16.81■□□□□ 0.28
NCK1-202ENST00000460960 SLKQ9H2G2 1235 aaPredicted RBP16.81■□□□□ 0.28
NCK1-202ENST00000460960 GCOM1H8Y6P7 765 aaPredicted RBP16.8■□□□□ 0.28
NCK1-202ENST00000460960 POLR2MP0CAP2 368 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 IFNAR1P17181 557 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 ZP2Q05996 745 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 MKRN4PQ13434 485 aaPredicted RBP16.8■□□□□ 0.28
NCK1-202ENST00000460960 HEATR3Q7Z4Q2 680 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 FIBCD1Q8N539 461 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 AIFM3Q96NN9 605 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 SLC26A6Q9BXS9 759 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 RNPEPQ9H4A4 650 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 SETD4Q9NVD3 440 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
NCK1-202ENST00000460960 DOCK5Q9H7D0 1870 aa16.8■□□□□ 0.28
NCK1-202ENST00000460960 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.79■□□□□ 0.28
NCK1-202ENST00000460960 STXBP3O00186 592 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 TGFB3P10600 412 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 GNAT1P11488 350 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 SP4Q02446 784 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 UTP14CQ5TAP6 766 aaKnown RBP16.79■□□□□ 0.28
NCK1-202ENST00000460960 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 RALGAPA2Q2PPJ7 1873 aa16.79■□□□□ 0.28
NCK1-202ENST00000460960 PRPF3O43395 683 aaKnown RBP16.78■□□□□ 0.28
NCK1-202ENST00000460960 JAK2O60674 1132 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 ARHGAP4P98171 946 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 NHLH1Q02575 133 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 GNPTABQ3T906 1256 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 CYFIP1Q7L576 1253 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 TRIM50Q86XT4 487 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 ADHFE1Q8IWW8 467 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 FBXL18Q96ME1 805 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 IGFLR1Q9H665 355 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 MAP3K20Q9NYL2 800 aaKnown RBP16.78■□□□□ 0.28
NCK1-202ENST00000460960 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 KAT6AQ92794 2004 aa16.78■□□□□ 0.28
NCK1-202ENST00000460960 CAND2O75155 1236 aa16.77■□□□□ 0.28
NCK1-202ENST00000460960 SCG2P13521 617 aa16.77■□□□□ 0.28
NCK1-202ENST00000460960 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
NCK1-202ENST00000460960 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
NCK1-202ENST00000460960 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.28
NCK1-202ENST00000460960 APBB2Q92870 758 aa16.77■□□□□ 0.28
NCK1-202ENST00000460960 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.28
NCK1-202ENST00000460960 ZNF215Q9UL58 517 aaPredicted RBP16.77■□□□□ 0.28
NCK1-202ENST00000460960 ATG2AQ2TAZ0 1938 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 POTEB3A0JP26 581 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 CPLX1O14810 134 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 GHRP10912 638 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 FDPSP14324 419 aaKnown RBP16.76■□□□□ 0.27
NCK1-202ENST00000460960 IRS1P35568 1242 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 GHRHRQ02643 423 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 NEDD9Q14511 834 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 UBE2SQ16763 222 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 USP17L6PQ6QN14 398 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 POTEBQ6S5H4 581 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 C11orf84Q9BUA3 381 aaPredicted RBP16.76■□□□□ 0.27
NCK1-202ENST00000460960 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
NCK1-202ENST00000460960 GJB4Q9NTQ9 266 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 MUTYHQ9UIF7 546 aa16.76■□□□□ 0.27
NCK1-202ENST00000460960 MEIS2O14770 477 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 GRM6O15303 877 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 NCK2O43639 380 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 ST18O60284 1047 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 HOXC8P31273 242 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms