RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 DDIT3P35638 169 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 FAM160B1Q5W0V3 765 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 ABHD15Q6UXT9 468 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 C7orf31Q8N865 590 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 ERAP1Q9NZ08 941 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 TELO2Q9Y4R8 837 aa12.49□□□□□ -0.41
APTX-209ENST00000460940 IGKV6D-21A0A0A0MT36 114 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 MARCH6O60337 910 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 PSAPP07602 524 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 CALCRLQ16602 461 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 PLPPR4Q7Z2D5 763 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 TRIM50Q86XT4 487 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 AFAP1L1Q8TED9 768 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 GLG1Q92896 1179 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 PDLIM7Q9NR12 457 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 PCDHA10Q9Y5I2 948 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
APTX-209ENST00000460940 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
APTX-209ENST00000460940 BACH1O14867 736 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 CD4P01730 458 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 SYT1P21579 422 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 PPP2R5CQ13362 524 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 B3GNT9Q6UX72 402 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 HAS1Q92839 578 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
APTX-209ENST00000460940 UNC45AQ9H3U1 944 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 DISC1Q9NRI5 854 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 GTF2IRD1Q9UHL9 959 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 VAV3Q9UKW4 847 aa12.48□□□□□ -0.41
APTX-209ENST00000460940 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 HOXC8P31273 242 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 MCM7P33993 719 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 STAT5BP51692 787 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 CSPP1Q1MSJ5 1256 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
APTX-209ENST00000460940 GBP4Q96PP9 640 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 PCYT2Q99447 389 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 ZNF302Q9NR11 478 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 TBX21Q9UL17 535 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 IGSF9BQ9UPX0 1349 aa12.47□□□□□ -0.41
APTX-209ENST00000460940 WNT7AO00755 349 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 CHMP2AO43633 222 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 B4GALT4O60513 344 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 SMIM10L2AP0DMW4 78 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 SMIM10L2BP0DMW5 78 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 GNAT1P11488 350 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 ATP2B1P20020 1258 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 CCDC60Q8IWA6 550 aaPredicted RBP12.46□□□□□ -0.41
APTX-209ENST00000460940 MTMR9Q96QG7 549 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.41
APTX-209ENST00000460940 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 HDAC6Q9UBN7 1215 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 NOD1Q9Y239 953 aa12.46□□□□□ -0.41
APTX-209ENST00000460940 NRCAMQ92823 1304 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 C17orf102A2RUQ5 167 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 LAD1O00515 517 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 STX6O43752 255 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 OR52Z1P0C646 297 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 PPFIA1Q13136 1202 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 PTGISQ16647 500 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 PDXDC2PQ6P474 469 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 ATP6V0A1Q93050 837 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 GJA10Q969M2 543 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 FAM167AQ96KS9 214 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 TRMT13Q9NUP7 481 aaKnown RBP12.46□□□□□ -0.42
APTX-209ENST00000460940 FAM13BQ9NYF5 915 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 MTMR6Q9Y217 621 aa12.46□□□□□ -0.42
APTX-209ENST00000460940 MAFBQ9Y5Q3 323 aaPredicted RBP12.46□□□□□ -0.42
APTX-209ENST00000460940 H0YGN5 161 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 TOB1P50616 345 aaPredicted RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 ZNF174Q15697 407 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 GDF6Q6KF10 455 aaPredicted RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 IPO4Q8TEX9 1081 aaKnown RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 ATP8B4Q8TF62 1192 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 CCDC94Q9BW85 323 aaPredicted RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 GABBR1Q9UBS5 961 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 ZMYND8Q9ULU4 1186 aaPredicted RBP12.45□□□□□ -0.42
APTX-209ENST00000460940 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 COL1A2P08123 1366 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 DNAH12Q6ZR08 3092 aa12.45□□□□□ -0.42
APTX-209ENST00000460940 UQCRHLA0A096LP55 91 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms