RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RAPGEF1Q13905 1077 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 MYBPC2Q14324 1141 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 ABCB5Q2M3G0 1257 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
HDAC3-202ENST00000459727 HGSNATQ68CP4 663 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 POTEBQ6S5H4 581 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 KCTD1Q719H9 257 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 KCNK18Q7Z418 384 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 CERS5Q8N5B7 392 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 C1orf131Q8NDD1 294 aaKnown RBP9.71□□□□□ -0.86
HDAC3-202ENST00000459727 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 WHAMMQ8TF30 809 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 SCFD1Q8WVM8 642 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 WDR11Q9BZH6 1224 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 HDAC9Q9UKV0 1011 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 PNMA2Q9UL42 364 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 DIS3Q9Y2L1 958 aaKnown RBP9.71□□□□□ -0.86
HDAC3-202ENST00000459727 FAN1Q9Y2M0 1017 aa9.71□□□□□ -0.86
HDAC3-202ENST00000459727 ATAD5Q96QE3 1844 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 LRRIQ3A6PVS8 624 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-202ENST00000459727 F5H6K3 240 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 F8W031 263 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-202ENST00000459727 CCDC188H7C350 402 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 MEIS2O14770 477 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 PLA2G6O60733 806 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 SRGAP2O75044 1071 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 BMP3P12645 472 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 ZNF76P36508 570 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 NPEPPSP55786 919 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 POLR2FP61218 127 aaKnown RBP9.7□□□□□ -0.86
HDAC3-202ENST00000459727 KLRC3Q07444 240 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 KCNH2Q12809 1159 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-202ENST00000459727 PPP2R5AQ15172 486 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 EXOC3L4Q17RC7 722 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 PRR16Q569H4 304 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 TTBK2Q6IQ55 1244 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 EPM2AIP1Q7L775 607 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-202ENST00000459727 HS2ST1Q7LGA3 356 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 KRT26Q7Z3Y9 468 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 MREGQ8N565 214 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 HPS3Q969F9 1004 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 NUDT12Q9BQG2 462 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 GANQ9H2C0 597 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 GOPCQ9HD26 462 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 KCNQ5Q9NR82 932 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 ODF2LQ9ULJ1 636 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 KIF13BQ9NQT8 1826 aa9.7□□□□□ -0.86
HDAC3-202ENST00000459727 GOLGA6CA6NDK9 693 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 E9PMD0 336 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 EPHB6O15197 1021 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 N4BP1O75113 896 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 NOL4O94818 638 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 FAM13AO94988 1023 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 NR3C1P04150 777 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 PLEKP08567 350 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 GOLGA6DP0CG33 693 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 LMNB1P20700 586 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 PSMC2P35998 433 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SLC16A2P36021 539 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 STAT2P52630 851 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 HNRNPH2P55795 449 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 RASSF7Q02833 373 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 GFPT1Q06210 699 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SPIRE1Q08AE8 756 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 C2orf54Q08AI8 447 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 PPP2R5CQ13362 524 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 CUL1Q13616 776 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 GIT2Q14161 759 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 LRRC41Q15345 812 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 RPS6KA1Q15418 735 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 KIAA0753Q2KHM9 967 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 MEI1Q5TIA1 1274 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 CEP350Q5VT06 3117 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 KLHDC7AQ5VTJ3 777 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 KRT27Q7Z3Y8 459 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 FAM160B2Q86V87 743 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 CATSPER3Q86XQ3 398 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SPATS2Q86XZ4 545 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SAMD3Q8N6K7 520 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SLC17A8Q8NDX2 589 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 SMCR8Q8TEV9 937 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 CHURC1Q8WUH1 139 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 CNKSR1Q969H4 720 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 NAP1L3Q99457 506 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 TLR10Q9BXR5 811 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 FAM204AQ9H8W3 233 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 MLXIPQ9HAP2 919 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 NLRC4Q9NPP4 1024 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
HDAC3-202ENST00000459727 BAZ2BQ9UIF8 2168 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 MRPL11Q9Y3B7 192 aaKnown RBP9.69□□□□□ -0.86
HDAC3-202ENST00000459727 MYH4Q9Y623 1939 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 ARFGEF1Q9Y6D6 1849 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 POTEFA5A3E0 1075 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L15C9J2P7 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L13C9JLJ4 530 aa9.68□□□□□ -0.86
HDAC3-202ENST00000459727 USP17L11C9JVI0 530 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms