RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 KLRK1P26718 216 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 TNNC1P63316 161 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 FKBP3Q00688 224 aaKnown RBP9.33□□□□□ -0.92
VPS50-208ENST00000458707 GUCY1A3Q02108 690 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 SEPT2Q15019 361 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 TMEM119Q4V9L6 283 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 FAM83BQ5T0W9 1011 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 SPTY2D1Q68D10 685 aaPredicted RBP9.33□□□□□ -0.92
VPS50-208ENST00000458707 C6orf89Q6UWU4 347 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 NLRP14Q86W24 1093 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 ZNF513Q8N8E2 541 aaPredicted RBP9.33□□□□□ -0.92
VPS50-208ENST00000458707 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 TBCKQ8TEA7 893 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 CELF1Q92879 486 aaKnown RBP9.33□□□□□ -0.92
VPS50-208ENST00000458707 DYNLL2Q96FJ2 89 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 CEP63Q96MT8 703 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 CCT8L2Q96SF2 557 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 TAF1DQ9H5J8 278 aaPredicted RBP9.33□□□□□ -0.92
VPS50-208ENST00000458707 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
VPS50-208ENST00000458707 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 COL4A3BPQ9Y5P4 624 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 NRAPQ86VF7 1730 aa9.33□□□□□ -0.92
VPS50-208ENST00000458707 AFF2P51816 1311 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ESYT3A0FGR9 886 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 H0YGN5 161 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 hCG_1984214I3L0E3 225 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 RAD51CO43502 376 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 RASA1P20936 1047 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ECHS1P30084 290 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 C1QTNF8P60827 252 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ITPK1Q13572 414 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 CUL1Q13616 776 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 TDRD12Q587J7 1177 aaKnown RBP9.32□□□□□ -0.92
VPS50-208ENST00000458707 C10orf76Q5T2E6 689 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ZC3H3Q8IXZ2 948 aaKnown RBP9.32□□□□□ -0.92
VPS50-208ENST00000458707 REXO1Q8N1G1 1221 aaKnown RBP9.32□□□□□ -0.92
VPS50-208ENST00000458707 ARFGAP2Q8N6H7 521 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ZNF713Q8N859 430 aaPredicted RBP9.32□□□□□ -0.92
VPS50-208ENST00000458707 SCFD2Q8WU76 684 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 IFT81Q8WYA0 676 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 KRT12Q99456 494 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 VCPKMTQ9H867 229 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 MKNK2Q9HBH9 465 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 NFS1Q9Y697 457 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 LOC102724428A0A0B4J2F2 783 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 RGL2O15211 777 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 EDIL3O43854 480 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 GNA14O95837 355 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 TXKP42681 527 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 GUCY2FP51841 1108 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 MNAT1P51948 309 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 SIK1P57059 783 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 PPP4CP60510 307 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ATP2B2Q01814 1243 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ACTN3Q08043 901 aaPredicted RBP9.32□□□□□ -0.92
VPS50-208ENST00000458707 CALCRLQ16602 461 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 TMEM266Q2M3C6 531 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 DYMQ7RTS9 669 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 TMC4Q7Z404 712 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 MYOCDQ8IZQ8 938 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
VPS50-208ENST00000458707 ACTRT1Q8TDG2 376 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 DDX12PQ92771 950 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 DNAJC19Q96DA6 116 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 RAB34Q9BZG1 259 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 ANKRD2Q9GZV1 360 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 NLRC4Q9NPP4 1024 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
VPS50-208ENST00000458707 GREB1LQ9C091 1923 aaPredicted RBP9.31□□□□□ -0.92
VPS50-208ENST00000458707 A0A087X0T9 212 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 MYO1FO00160 1098 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 FTCDO95954 541 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 FAM228BP0C875 321 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 ZBTB48P10074 688 aaPredicted RBP9.31□□□□□ -0.92
VPS50-208ENST00000458707 NOVP48745 357 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 SMTNP53814 917 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 HDLBPQ00341 1268 aaKnown RBP9.31□□□□□ -0.92
VPS50-208ENST00000458707 BIRC3Q13489 604 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 RINLQ6ZS11 566 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 DZIP1Q86YF9 867 aaKnown RBP9.31□□□□□ -0.92
VPS50-208ENST00000458707 GLIS3Q8NEA6 775 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 ZNF526Q8TF50 670 aaPredicted RBP9.31□□□□□ -0.92
VPS50-208ENST00000458707 TBC1D5Q92609 795 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 LRRC45Q96CN5 670 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 PBKQ96KB5 322 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 TSPAN18Q96SJ8 248 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 LSM14BQ9BX40 385 aaKnown RBP9.31□□□□□ -0.92
VPS50-208ENST00000458707 GANQ9H2C0 597 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 RIOX1Q9H6W3 641 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 SLC12A6Q9UHW9 1150 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 STX8Q9UNK0 236 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 RPS6KL1Q9Y6S9 549 aa9.31□□□□□ -0.92
VPS50-208ENST00000458707 RASSF9O75901 435 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 KIF4AO95239 1232 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 PAEPP09466 180 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 GOLGA8HP0CJ92 632 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms