RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 GOLGA8KD6RF30 607 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 EPS15P42566 896 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 CRY2Q49AN0 593 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 DCAF17Q5H9S7 520 aaPredicted RBP15.53■□□□□ 0.08
SCFD1-203ENST00000458591 CDC42EP5Q6NZY7 148 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 IRF2BP2Q7Z5L9 587 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 SFR1Q86XK3 245 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 OR2W6PQ8NHA6 318 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 IPO4Q8TEX9 1081 aaKnown RBP15.53■□□□□ 0.08
SCFD1-203ENST00000458591 RUBCNQ92622 972 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 RUFY1Q96T51 708 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 LRRC27Q9C0I9 530 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 DHX36Q9H2U1 1008 aaKnown RBP15.53■□□□□ 0.08
SCFD1-203ENST00000458591 DNAJC18Q9H819 358 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 EIF3HO15372 352 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCFD1-203ENST00000458591 ZEB2O60315 1214 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 GUCY1A3Q02108 690 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 USH1GQ495M9 461 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 IFT20Q8IY31 132 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
SCFD1-203ENST00000458591 RNPC3Q96LT9 517 aaKnown RBP15.53■□□□□ 0.08
SCFD1-203ENST00000458591 CEP63Q96MT8 703 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 ANO3Q9BYT9 981 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
SCFD1-203ENST00000458591 NOP2P46087 812 aaKnown RBP15.52■□□□□ 0.08
SCFD1-203ENST00000458591 LIG3P49916 1009 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 GIT2Q14161 759 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 HYIQ5T013 277 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 KSR1Q8IVT5 923 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 IQCKQ8N0W5 287 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 REEP2Q9BRK0 252 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 KCNMB3Q9NPA1 279 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 PCDHGC5Q9Y5F6 944 aa15.52■□□□□ 0.08
SCFD1-203ENST00000458591 MEIS2O14770 477 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 OPA1O60313 960 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 AKAP3O75969 853 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 DDR1Q08345 913 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 VPS72Q15906 364 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 CFAP58Q5T655 872 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 TCERG1LQ5VWI1 586 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 SLF2Q8IX21 1173 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 EFCAB13Q8IY85 973 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 NEUROG2Q9H2A3 272 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 PLIN4Q96Q06 1357 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 MYH7BA7E2Y1 1941 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 ZBTB39O15060 712 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 CETN3O15182 167 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 SPATA31C1P0DKV0 1188 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 EEF2P13639 858 aaKnown RBP15.51■□□□□ 0.07
SCFD1-203ENST00000458591 UCHL3P15374 230 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 ERVK-9P63128 1117 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 SPIRE1Q08AE8 756 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 CDC37Q16543 378 aaPredicted RBP15.51■□□□□ 0.07
SCFD1-203ENST00000458591 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 SYN2Q92777 582 aaPredicted RBP15.51■□□□□ 0.07
SCFD1-203ENST00000458591 NT5C3AQ9H0P0 336 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 FAM169AQ9Y6X4 670 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 BTAF1O14981 1849 aa15.51■□□□□ 0.07
SCFD1-203ENST00000458591 FAM86B1E9PN63 330 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 CEP104O60308 925 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 FAM86B2P0C5J1 330 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 ITGA4P13612 1032 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 PON1P27169 355 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 HOXA13P31271 388 aaPredicted RBP15.5■□□□□ 0.07
SCFD1-203ENST00000458591 ALS2CLQ60I27 953 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 CERS3Q8IU89 383 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 MICALL1Q8N3F8 863 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 TBC1D22AQ8WUA7 517 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 SPAG5Q96R06 1193 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 LRRC4CQ9HCJ2 640 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 FLT3P36888 993 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 MARSP56192 900 aaKnown RBP15.5■□□□□ 0.07
SCFD1-203ENST00000458591 CENPHQ9H3R5 247 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 RGL1Q9NZL6 768 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 BCS1LQ9Y276 419 aa15.5■□□□□ 0.07
SCFD1-203ENST00000458591 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 TNFRSF8P28908 595 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 SEC24CP53992 1094 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 APOBEC3HQ6NTF7 200 aaKnown RBP15.49■□□□□ 0.07
SCFD1-203ENST00000458591 PPP1R18Q6NYC8 613 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 SIAH1Q8IUQ4 282 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 DDX47Q9H0S4 455 aaKnown RBP15.49■□□□□ 0.07
SCFD1-203ENST00000458591 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 KDM3AQ9Y4C1 1321 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 NHSQ6T4R5 1651 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 DDTLA6NHG4 134 aaPredicted RBP15.49■□□□□ 0.07
SCFD1-203ENST00000458591 GDF11O95390 407 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
SCFD1-203ENST00000458591 ECHS1P30084 290 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 ARHGAP4P98171 946 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 HLTFQ14527 1009 aaKnown RBP eCLIP15.49■□□□□ 0.071e-7■□□□□ 9.6
SCFD1-203ENST00000458591 SEPT2Q15019 361 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 RPS6KA1Q15418 735 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 GBP6Q6ZN66 633 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 ETNPPLQ8TBG4 499 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 PIGOQ8TEQ8 1089 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 KAT2BQ92831 832 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms