RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
HDLBP-227ENST00000458564 SQORQ9Y6N5 450 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
HDLBP-227ENST00000458564 GSTTP1A0A1W2PQM5 241 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 ENPP3O14638 875 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 DGKIO75912 1065 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 HYAL1Q12794 435 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 MTMR1Q13613 665 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 TEX2Q8IWB9 1127 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 P2RX5Q93086 422 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 POP1Q99575 1024 aaKnown RBP11.98□□□□□ -0.49
HDLBP-227ENST00000458564 MYL10Q9BUA6 226 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 SMARCAD1Q9H4L7 1026 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 UBIAD1Q9Y5Z9 338 aa11.98□□□□□ -0.49
HDLBP-227ENST00000458564 ZNF318Q5VUA4 2279 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 RRN3P2A6NIE6 340 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 TBX10O75333 385 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 MARK3P27448 753 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 MRPS6P82932 125 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 SMAD4Q13485 552 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 BTG3Q14201 252 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 NAALADL2Q58DX5 795 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 FAM43BQ6ZT52 329 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 CMTR2Q8IYT2 770 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 TMTC2Q8N394 836 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 DNAJB3Q8WWF6 145 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 LINC01599Q8WXQ3 324 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 GLG1Q92896 1179 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 TMEM87BQ96K49 555 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 FTHL17Q9BXU8 183 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 UPF3BQ9BZI7 483 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 AGO3Q9H9G7 860 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 JADE2Q9NQC1 790 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 RBM8AQ9Y5S9 174 aaKnown RBP11.97□□□□□ -0.49
HDLBP-227ENST00000458564 CDY2AQ9Y6F7 541 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 KAT6AQ92794 2004 aa11.97□□□□□ -0.49
HDLBP-227ENST00000458564 IGSF9BQ9UPX0 1349 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 SH2B2O14492 632 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-227ENST00000458564 MBTPS2O43462 519 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 PRC1O43663 620 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 CALM1P0DP23 149 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 CALM2P0DP24 149 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 CALM3P0DP25 149 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 IRS1P35568 1242 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 LIFRP42702 1097 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 DLX2Q07687 328 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-227ENST00000458564 CAMK1Q14012 370 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 HERC4Q5GLZ8 1057 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-227ENST00000458564 IER5Q5VY09 327 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 EP400NLQ6ZTU2 488 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 NPAS4Q8IUM7 802 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 PCYT2Q99447 389 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 JPH1Q9HDC5 661 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-227ENST00000458564 PLAGL2Q9UPG8 496 aa11.96□□□□□ -0.49
HDLBP-227ENST00000458564 NFASCO94856 1347 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 KDM3AQ9Y4C1 1321 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 EYA4O95677 639 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 INSRRP14616 1297 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 CD52P31358 61 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 MCM5P33992 734 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 ADAM15Q13444 863 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 UBE2SQ16763 222 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 TMTC3Q6ZXV5 915 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 TNPO1Q92973 898 aaKnown RBP11.95□□□□□ -0.5
HDLBP-227ENST00000458564 PPP2R3CQ969Q6 453 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 MSLNLQ96KJ4 702 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 UIMC1Q96RL1 719 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 SLC9A2Q9UBY0 812 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 PCDHA6Q9UN73 950 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 PCDHA8Q9Y5H6 950 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 PCDHA2Q9Y5H9 948 aa11.95□□□□□ -0.5
HDLBP-227ENST00000458564 MRPL42Q9Y6G3 142 aaKnown RBP11.95□□□□□ -0.5
HDLBP-227ENST00000458564 CCDC69A6NI79 296 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 M0QZ92 97 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 ITGB1P05556 798 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.55e-9■■■■■ 29.4
HDLBP-227ENST00000458564 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 PLPPR4Q7Z2D5 763 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 RTN4RL1Q86UN2 441 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-227ENST00000458564 SGMS1Q86VZ5 419 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 SMRP1Q8NCR6 262 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-227ENST00000458564 AZI2Q9H6S1 392 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 ALG13Q9NP73 1137 aaKnown RBP11.94□□□□□ -0.5
HDLBP-227ENST00000458564 KCNH7Q9NS40 1196 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 CD207Q9UJ71 328 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 PADI3Q9ULW8 664 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 TRPV2Q9Y5S1 764 aa11.94□□□□□ -0.5
HDLBP-227ENST00000458564 SMIM35A0A1B0GVV1 85 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 LINC01565O15544 149 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 STAG3L1P0CL83 205 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 SCG2P13521 617 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 RXRAP19793 462 aa11.93□□□□□ -0.5
HDLBP-227ENST00000458564 DNAJB1P25685 340 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms