RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 TLR2O60603 784 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 MED24O75448 989 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 EYA4O95677 639 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 P4HBP07237 508 aaKnown RBP9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 PLA2G4BP0C869 781 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 SPATA31C1P0DKV0 1188 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 KCNA2P16389 499 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 TM4SF4P48230 202 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 LSM11P83369 360 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 CNTN2Q02246 1040 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 PSMD2Q13200 908 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 ITGB3BPQ13352 177 aaPredicted RBP9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 STIM1Q13586 685 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 GRB14Q14449 540 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 NEDD9Q14511 834 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 DPCR1Q3MIW9 517 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 ZNF658Q5TYW1 1059 aaPredicted RBP9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 UNC13DQ70J99 1090 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 MIER3Q7Z3K6 550 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 PLEKHH3Q7Z736 793 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 ATP6V0A1Q93050 837 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 PORCNQ9H237 461 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 UNC45AQ9H3U1 944 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 ZSWIM4Q9H7M6 989 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 CBX8Q9HC52 389 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 JPH1Q9HDC5 661 aaPredicted RBP9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 EXOC1Q9NV70 894 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
CDC42EP3-204ENST00000457889 ASTN1O14525 1302 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 EML1O00423 815 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 IGF2BP3O00425 579 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 BIN1O00499 593 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 PPP1R37O75864 691 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 RGS20O76081 388 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 KIF20AO95235 890 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 PSAPP07602 524 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 ADORA2AP29274 412 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 QARSP47897 775 aaKnown RBP9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 PSMC5P62195 406 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 ASIC1P78348 528 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 MYL5Q02045 173 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 CUL4BQ13620 913 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 IQCB1Q15051 598 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 ZNF792Q3KQV3 632 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 WDR78Q5VTH9 848 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 FOXR2Q6PJQ5 311 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 C11orf57Q6ZUT1 292 aaPredicted RBP9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 GPR142Q7Z601 462 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 CCDC65Q8IXS2 484 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 C4orf19Q8IY42 314 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 GRAMD1CQ8IYS0 662 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 SYT2Q8N9I0 419 aaPredicted RBP9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 RNF214Q8ND24 703 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 SOCS4Q8WXH5 440 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 GJA10Q969M2 543 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 NUDT12Q9BQG2 462 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 LXNQ9BS40 222 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 TIPINQ9BVW5 301 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 EFCC1Q9HA90 598 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 VTA1Q9NP79 307 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 SLC9A2Q9UBY0 812 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 DBR1Q9UK59 544 aaKnown RBP9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 PCDHA10Q9Y5I2 948 aa9.94□□□□□ -0.82
CDC42EP3-204ENST00000457889 LRRC37A2A6NM11 1700 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 SYNGAP1Q96PV0 1343 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 RASSF10A6NK89 507 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 CHMP2AO43633 222 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 SLITRK3O94933 977 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 HOXC6P09630 235 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 SLC12A3P55017 1021 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 MCM6Q14566 821 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 MIS18BP1Q6P0N0 1132 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 SARM1Q6SZW1 724 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 C17orf99Q6UX52 265 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 METTL7BQ6UX53 244 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 MAMDC4Q6UXC1 1216 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 ENOX1Q8TC92 643 aaKnown RBP9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 SCFD2Q8WU76 684 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 DDX12PQ92771 950 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 ERCC4Q92889 916 aaPredicted RBP9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 FGD4Q96M96 766 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 PURBQ96QR8 312 aaKnown RBP9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 PLIN2Q99541 437 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 ANKEF1Q9NU02 776 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 SAMM50Q9Y512 469 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 PPME1Q9Y570 386 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 PLXNB2O15031 1838 aa9.93□□□□□ -0.82
CDC42EP3-204ENST00000457889 KIAA1217Q5T5P2 1943 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 BICDL2A1A5D9 508 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 FRMD3A2A2Y4 597 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 MYMKA6NI61 221 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 PSMA7O14818 248 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 CA12O43570 354 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 KLRC4O43908 158 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 GAP43P17677 238 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 CYP11B2P19099 503 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 BMP6P22004 513 aa9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 UBA1P22314 1058 aaKnown RBP9.92□□□□□ -0.82
CDC42EP3-204ENST00000457889 GUCY2CP25092 1073 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms