RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 WNT16Q9UBV4 365 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 ZMIZ1Q9ULJ6 1067 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 MTMR7Q9Y216 660 aa19.01■□□□□ 0.63
SF3B4-202ENST00000457312 SMG1Q96Q15 3661 aaKnown RBP19■□□□□ 0.63
SF3B4-202ENST00000457312 H3BRB1 525 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 CFHP08603 1231 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 STXBP2Q15833 593 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 RARS2Q5T160 578 aaKnown RBP19■□□□□ 0.63
SF3B4-202ENST00000457312 GIMAP6Q6P9H5 292 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 RTN4RL1Q86UN2 441 aaPredicted RBP19■□□□□ 0.63
SF3B4-202ENST00000457312 THNSL1Q8IYQ7 743 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 TUT1Q9H6E5 874 aaKnown RBP19■□□□□ 0.63
SF3B4-202ENST00000457312 KCNK12Q9HB15 430 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 ENTPD7Q9NQZ7 604 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 AAASQ9NRG9 546 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 SETD4Q9NVD3 440 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 COL20A1Q9P218 1284 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 HCSTQ9UBK5 93 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
SF3B4-202ENST00000457312 DOCK5Q9H7D0 1870 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
SF3B4-202ENST00000457312 ZIC2O95409 532 aaPredicted RBP18.99■□□□□ 0.63
SF3B4-202ENST00000457312 ADAM17P78536 824 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 FBXO47Q5MNV8 452 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 XRRA1Q6P2D8 792 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 COLGALT1Q8NBJ5 622 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 FEZF2Q8TBJ5 459 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 BORCS6Q96GS4 357 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 TAAR1Q96RJ0 339 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 STRBPQ96SI9 672 aaKnown RBP18.99■□□□□ 0.63
SF3B4-202ENST00000457312 EPC1Q9H2F5 836 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 CA14Q9ULX7 337 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 STX8Q9UNK0 236 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 LZTS1Q9Y250 596 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 UNC79Q9P2D8 2635 aa18.99■□□□□ 0.63
SF3B4-202ENST00000457312 RALGAPA1Q6GYQ0 2036 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 DOCK8Q8NF50 2099 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 LGALS2P05162 132 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 STAG3L1P0CL83 205 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 GLULP15104 373 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 TFAP4Q01664 338 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 ZNF528Q3MIS6 628 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 CELF3Q5SZQ8 465 aaKnown RBP18.98■□□□□ 0.63
SF3B4-202ENST00000457312 SPOUT1Q5T280 376 aaKnown RBP18.98■□□□□ 0.63
SF3B4-202ENST00000457312 TSHZ1Q6ZSZ6 1077 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 C12orf76Q8N812 135 aaPredicted RBP18.98■□□□□ 0.63
SF3B4-202ENST00000457312 NSUN6Q8TEA1 469 aaKnown RBP18.98■□□□□ 0.63
SF3B4-202ENST00000457312 DCAF4Q8WV16 495 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 LMBR1Q8WVP7 490 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
SF3B4-202ENST00000457312 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.98■□□□□ 0.63
SF3B4-202ENST00000457312 DSPP15924 2871 aaKnown RBP18.98■□□□□ 0.63
SF3B4-202ENST00000457312 NBEAQ8NFP9 2946 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 KCNA4P22459 653 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 KANK3Q6NY19 840 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 RUFY4Q6ZNE9 571 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 RGS22Q8NE09 1264 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 SYTL5Q8TDW5 730 aaPredicted RBP18.97■□□□□ 0.63
SF3B4-202ENST00000457312 MRPS27Q92552 414 aaKnown RBP18.97■□□□□ 0.63
SF3B4-202ENST00000457312 IWS1Q96ST2 819 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 AGO3Q9H9G7 860 aaKnown RBP18.97■□□□□ 0.63
SF3B4-202ENST00000457312 IL1RAPL2Q9NP60 686 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 PNMA2Q9UL42 364 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 SIT1Q9Y3P8 196 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 PCDHGA2Q9Y5H1 932 aa18.97■□□□□ 0.63
SF3B4-202ENST00000457312 GGPS1O95749 300 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 GNAT1P11488 350 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 SCG2P13521 617 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 ATAT1Q5SQI0 421 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 PHLDB3Q6NSJ2 640 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 ACSF2Q96CM8 615 aaPredicted RBP18.96■□□□□ 0.63
SF3B4-202ENST00000457312 NGRNQ9NPE2 291 aaKnown RBP18.96■□□□□ 0.63
SF3B4-202ENST00000457312 EXOC6BQ9Y2D4 811 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 FRMPD2Q68DX3 1309 aaPredicted RBP18.96■□□□□ 0.63
SF3B4-202ENST00000457312 MYH6P13533 1939 aa18.96■□□□□ 0.63
SF3B4-202ENST00000457312 NMT2O60551 498 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 EIF3JO75822 258 aaKnown RBP18.95■□□□□ 0.62
SF3B4-202ENST00000457312 TRIM27P14373 513 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 CD52P31358 61 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 ARHGAP4P98171 946 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 N4BP2L1Q5TBK1 243 aaPredicted RBP18.95■□□□□ 0.62
SF3B4-202ENST00000457312 TBC1D5Q92609 795 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 RMDN3Q96TC7 470 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
SF3B4-202ENST00000457312 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.94■□□□□ 0.62
SF3B4-202ENST00000457312 C1QTNF9BB2RNN3 333 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 C1QTNF9P0C862 333 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
SF3B4-202ENST00000457312 UBA1P22314 1058 aaKnown RBP18.94■□□□□ 0.62
SF3B4-202ENST00000457312 PLCB3Q01970 1234 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 LRSAM1Q6UWE0 723 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 OTOP3Q7RTS5 596 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 ZBTB44Q8NCP5 570 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 IL17RBQ9NRM6 502 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 IGSF9Q9P2J2 1179 aa18.94■□□□□ 0.62
SF3B4-202ENST00000457312 FBXO4Q9UKT5 387 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms