RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
CPSF6-203ENST00000456847 IL17RAQ96F46 866 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 TBC1D22BQ9NU19 505 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 PCDHA11Q9Y5I1 949 aa18.41■□□□□ 0.54
CPSF6-203ENST00000456847 MYH9P35579 1960 aaKnown RBP18.4■□□□□ 0.54
CPSF6-203ENST00000456847 CCNE2O96020 404 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 FOSL2P15408 326 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 CIITAP33076 1130 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 ADAM17P78536 824 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 MBTPS1Q14703 1052 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 GALNT17Q6IS24 598 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 MIS18BP1Q6P0N0 1132 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 RSPH3Q86UC2 560 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 DAGLBQ8NCG7 672 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 TBCKQ8TEA7 893 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 MICAL3Q7RTP6 2002 aa18.4■□□□□ 0.54
CPSF6-203ENST00000456847 DTNBO60941 627 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 WDR5P61964 334 aaKnown RBP18.39■□□□□ 0.53
CPSF6-203ENST00000456847 IKBKEQ14164 716 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 GRIN2CQ14957 1233 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 PPP2R2DQ66LE6 453 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 TAF2Q6P1X5 1199 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 PLPPR4Q7Z2D5 763 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 PHOSPHO2Q8TCD6 241 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 ORC3Q9UBD5 711 aaPredicted RBP18.39■□□□□ 0.53
CPSF6-203ENST00000456847 SIP14410 1827 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 RRN3P2A6NIE6 340 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 EFCAB14O75071 495 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 LARGE1O95461 756 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 INSRRP14616 1297 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 MYOGP15173 224 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 USP11P51784 963 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 HERC6Q8IVU3 1022 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 WASF1Q92558 559 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 ZNF302Q9NR11 478 aa18.39■□□□□ 0.53
CPSF6-203ENST00000456847 ABHD14A-ACY1A0A1B0GW23 586 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 DHX15O43143 795 aaKnown RBP18.38■□□□□ 0.53
CPSF6-203ENST00000456847 ATG7O95352 703 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 SLC26A2P50443 739 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 KRT76Q01546 638 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 NONOQ15233 471 aaKnown RBP eCLIP18.38■□□□□ 0.532e-6■■■□□ 18.6
CPSF6-203ENST00000456847 ME3Q16798 604 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 TCTN1Q2MV58 587 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 ZNF746Q6NUN9 644 aaPredicted RBP18.38■□□□□ 0.53
CPSF6-203ENST00000456847 ABHD15Q6UXT9 468 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 KRT25Q7Z3Z0 450 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 GTF3C6Q969F1 213 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 SAMM50Q9Y512 469 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 WDR81Q562E7 1941 aa18.38■□□□□ 0.53
CPSF6-203ENST00000456847 POTEB3A0JP26 581 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 POTEBQ6S5H4 581 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
CPSF6-203ENST00000456847 CKAP2LQ8IYA6 745 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 DBF4BQ8NFT6 615 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 SEPT8Q92599 483 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 GAS2L1Q99501 681 aaPredicted RBP18.37■□□□□ 0.53
CPSF6-203ENST00000456847 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 CCDC194A0A1B0GVG4 234 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 DEFB103AP81534 67 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 SWSAP1Q6NVH7 229 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 SMAP1Q8IYB5 467 aaPredicted RBP18.37■□□□□ 0.53
CPSF6-203ENST00000456847 TRAPPC12Q8WVT3 735 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 DNAJB3Q8WWF6 145 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 LENG9Q96B70 501 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 PHF20Q9BVI0 1012 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
CPSF6-203ENST00000456847 PRDM12Q9H4Q4 367 aa18.37■□□□□ 0.53
CPSF6-203ENST00000456847 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 MBLAC1A4D2B0 266 aaPredicted RBP18.36■□□□□ 0.53
CPSF6-203ENST00000456847 RBAK-RBAKDNI3L0D1 243 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 TLL1O43897 1013 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 GAS7O60861 476 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 TDP2O95551 362 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 CA3P07451 260 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 PSAPP07602 524 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 NPY5RQ15761 445 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 PLEKHG4Q58EX7 1191 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 MAFAQ8NHW3 353 aaPredicted RBP18.36■□□□□ 0.53
CPSF6-203ENST00000456847 ZBTB10Q96DT7 871 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 TEKT3Q9BXF9 490 aa18.36■□□□□ 0.53
CPSF6-203ENST00000456847 M0R2N6 131 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 MSH4O15457 936 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 HBP1O60381 514 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 INF2Q27J81 1249 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 FAM26DQ5JW98 314 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 LRCH2Q5VUJ6 765 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 TMCO2Q7Z6W1 182 aaPredicted RBP18.35■□□□□ 0.53
CPSF6-203ENST00000456847 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 GJB4Q9NTQ9 266 aa18.35■□□□□ 0.53
CPSF6-203ENST00000456847 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
CPSF6-203ENST00000456847 WDR64B1ANS9 1081 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms