RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZC3H12CQ9C0D7 883 aaKnown RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 CD209Q9NNX6 404 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 PIM2Q9P1W9 311 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 PUF60Q9UHX1 559 aaKnown RBP6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 CCDC88AQ3V6T2 1871 aa6.04□□□□□ -1.44
HMGB1P4-201ENST00000455362 COL1A1P02452 1464 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAST3O60307 1309 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 CCDC171Q6TFL3 1326 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 FAM205AQ6ZU69 1335 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZNF532Q9HCE3 1301 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 LTBP3Q9NS15 1303 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 KIAA1551Q9HCM1 1747 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 DUOX1Q9NRD9 1551 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 SNED1Q8TER0 1413 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 FAM86C2PA6NEL3 165 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 RASSF10A6NK89 507 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 M0R2C6 588 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 TCEA3O75764 348 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 ABLIM3O94929 683 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 MAP3K6O95382 1288 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 MYL3P08590 195 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 NAT2P11245 290 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 HSPA4P34932 840 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 DGKGP49619 791 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 NECTIN1Q15223 517 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 PCBP1Q15365 356 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZYXQ15942 572 aaKnown RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 GNPTABQ3T906 1256 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 COL13A1Q5TAT6 717 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 PKN3Q6P5Z2 889 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 RTKN2Q8IZC4 609 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 ENAHQ8N8S7 591 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 TMEM102Q8N9M5 508 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 PJA1Q8NG27 643 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 ZNF384Q8TF68 577 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 NXPE3Q969Y0 559 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 GAL3ST3Q96A11 431 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 EYA3Q99504 573 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 AARSD1Q9BTE6 412 aaKnown RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 PAGR1Q9BTK6 254 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 SARGQ9BW04 601 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 RHOBTB2Q9BYZ6 727 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 COA1Q9GZY4 146 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 SPON1Q9HCB6 807 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 ABCF2Q9UG63 623 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 PALD1Q9ULE6 856 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 LUC7L2Q9Y383 392 aaKnown RBP6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 SCINQ9Y6U3 715 aa6.03□□□□□ -1.44
HMGB1P4-201ENST00000455362 BRCA1P38398 1863 aaKnown RBP6.02□□□□□ -1.44
HMGB1P4-201ENST00000455362 SALL1Q9NSC2 1324 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 MYH2Q9UKX2 1941 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 A0A1W2PQU0 124 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 DCDC2BA2VCK2 349 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 PDE2AO00408 941 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 GABRDO14764 452 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 EFSO43281 561 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 GPAA1O43292 621 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 OPA1O60313 960 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 KPNA6O60684 536 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 DNAJC8O75937 253 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 FBXO21O94952 628 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 HTR3BO95264 441 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 HSPD1P10809 573 aaKnown RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 HOXD8P13378 290 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 BMP1P13497 986 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 CYP7A1P22680 504 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 MCCP23508 829 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 CCND1P24385 295 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 ARNTP27540 789 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 FLT3P36888 993 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 MECOMQ03112 1051 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 SPEM2Q0P670 501 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 PCSK7Q16549 785 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 PTPN21Q16825 1174 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 MINDY4Q4G0A6 757 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 L1TD1Q5T7N2 865 aaKnown RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 VPS53Q5VIR6 699 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 YOD1Q5VVQ6 348 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 CCDC70Q6NSX1 233 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 RIPOR1Q6ZS17 1223 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 CPXCR1Q8N123 301 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 CEP120Q8N960 986 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 ANKRD42Q8N9B4 389 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 TEX19Q8NA77 164 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 SUPT20HQ8NEM7 779 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 GRIN3AQ8TCU5 1115 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 COG1Q8WTW3 980 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 NSUN4Q96CB9 384 aaKnown RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 TIFAQ96CG3 184 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 HHIPQ96QV1 700 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 STRBPQ96SI9 672 aaKnown RBP6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 TRIM8Q9BZR9 551 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 JADE2Q9NQC1 790 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 ARHGEF4Q9NR80 690 aa6.02□□□□□ -1.45
HMGB1P4-201ENST00000455362 RAI14Q9P0K7 980 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms