RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SETD4Q9NVD3 440 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 ERAP1Q9NZ08 941 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 REV3LO60673 3130 aa9.23□□□□□ -0.93
NIF3L1-209ENST00000454952 TTC3P53804 2025 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 MUC6Q6W4X9 2439 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 MYO7AQ13402 2215 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 E7EWF7 191 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 MAFGO15525 162 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CYTH3O43739 400 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CYP21A2P08686 494 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CALM1P0DP23 149 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CALM2P0DP24 149 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CALM3P0DP25 149 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CTNNB1P35222 781 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 ADAM17P78536 824 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 PPFIA1Q13136 1202 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CAMK2BQ13554 666 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 TTC22Q5TAA0 569 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 UTP14CQ5TAP6 766 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 CASC1Q6TDU7 716 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 DDX27Q96GQ7 796 aaKnown RBP9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 KCNH6Q9H252 994 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 SMARCAD1Q9H4L7 1026 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 RTEL1Q9NZ71 1219 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 ADGRA3Q8IWK6 1321 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 PIEZO1Q92508 2521 aa9.22□□□□□ -0.93
NIF3L1-209ENST00000454952 RRN3P2A6NIE6 340 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 SPDYE3A6NKU9 549 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 M0QZ92 97 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 DCXO43602 365 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 IL9P15248 144 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 TCF7P36402 384 aaPredicted RBP9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 BMPR1AP36894 532 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 SEMA3FQ13275 785 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 SLC35G1Q2M3R5 365 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 NAALADL2Q58DX5 795 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 TCEAL5Q5H9L2 206 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 IER5LQ5T953 404 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 IER5Q5VY09 327 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 TSHZ1Q6ZSZ6 1077 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 EP400NLQ6ZTU2 488 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 TRIM50Q86XT4 487 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 ADHFE1Q8IWW8 467 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 GLG1Q92896 1179 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 FTHL17Q9BXU8 183 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 PSTPIP2Q9H939 334 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 CD320Q9NPF0 282 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 TUBE1Q9UJT0 475 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 SQORQ9Y6N5 450 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 XIRP2A4UGR9 3374 aa9.21□□□□□ -0.94
NIF3L1-209ENST00000454952 FSD2A1L4K1 749 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 MBLAC1A4D2B0 266 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 FAM86C2PA6NEL3 165 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 CCDC69A6NI79 296 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 H3BQ06 376 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 MEIS2O14770 477 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 CHRNA1P02708 482 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 STAG3L1P0CL83 205 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 GHRP10912 638 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 CHMLP26374 656 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 MCM5P33992 734 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 SP4Q02446 784 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 MTMR1Q13613 665 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 BTG3Q14201 252 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 GRIK4Q16099 956 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 USP17L6PQ6QN14 398 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 NFXL1Q6ZNB6 911 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 IGDCC4Q8TDY8 1250 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 KHSRPQ92945 711 aaKnown RBP eCLIP9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 CLP1Q92989 425 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 TMEM87BQ96K49 555 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 AZI2Q9H6S1 392 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 CLDND1Q9NY35 253 aa9.2□□□□□ -0.94
NIF3L1-209ENST00000454952 ENPP3O14638 875 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 SGSM2O43147 1006 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 MMP1P03956 469 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 GSPT1P15170 499 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 KCNA2P16389 499 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 MRPS6P82932 125 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 PTH1RQ03431 593 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 ZP2Q05996 745 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 MGAT3Q09327 533 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 SMAD4Q13485 552 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 LPIN1Q14693 890 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 CTC1Q2NKJ3 1217 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 FBXO47Q5MNV8 452 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 ODR4Q5SWX8 454 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 NPAS4Q8IUM7 802 aa9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 MB21D2Q8IYB1 491 aaPredicted RBP9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 CMTR2Q8IYT2 770 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-209ENST00000454952 NME8Q8N427 588 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms