RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 CDX2Q99626 313 aaPredicted RBP34.1■■■■□ 3.05
CCDC117-206ENST00000453543 YBX2Q9Y2T7 364 aaKnown RBP34.1■■■■□ 3.05
CCDC117-206ENST00000453543 CTSHP09668 335 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 RAB30Q15771 203 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 CNKSR3Q6P9H4 555 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 RUFY4Q6ZNE9 571 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 FAM177A1Q8N128 213 aaPredicted RBP34.09■■■■□ 3.05
CCDC117-206ENST00000453543 TBCKQ8TEA7 893 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 GTF3C6Q969F1 213 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 ZNF576Q9H609 170 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 GJB4Q9NTQ9 266 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 MSRAQ9UJ68 235 aa34.09■■■■□ 3.05
CCDC117-206ENST00000453543 BAIAP3O94812 1187 aa34.08■■■■□ 3.05
CCDC117-206ENST00000453543 STAT5BP51692 787 aa34.08■■■■□ 3.05
CCDC117-206ENST00000453543 GALNT17Q6IS24 598 aa34.08■■■■□ 3.05
CCDC117-206ENST00000453543 ABHD15Q6UXT9 468 aa34.08■■■■□ 3.05
CCDC117-206ENST00000453543 PHF20Q9BVI0 1012 aa34.08■■■■□ 3.05
CCDC117-206ENST00000453543 ORC3Q9UBD5 711 aaPredicted RBP34.08■■■■□ 3.05
CCDC117-206ENST00000453543 IGKV6D-21A0A0A0MT36 114 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 USP11P51784 963 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 IGBP1P78318 339 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 PLCB4Q15147 1175 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 MARCH8Q5T0T0 291 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 PLPPR4Q7Z2D5 763 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 OSBPL7Q9BZF2 842 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 NKX2-4Q9H2Z4 354 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 TUBE1Q9UJT0 475 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 TRPC6Q9Y210 931 aa34.07■■■■□ 3.04
CCDC117-206ENST00000453543 PTPRSQ13332 1948 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 CAND2O75155 1236 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 INSRRP14616 1297 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 MYOGP15173 224 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 CCDC60Q8IWA6 550 aaPredicted RBP34.06■■■■□ 3.04
CCDC117-206ENST00000453543 MYLIPQ8WY64 445 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 ZBTB10Q96DT7 871 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 SLC9A7Q96T83 725 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 C22orf23Q9BZE7 217 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 TBC1D22BQ9NU19 505 aa34.06■■■■□ 3.04
CCDC117-206ENST00000453543 MBLAC1A4D2B0 266 aaPredicted RBP34.05■■■■□ 3.04
CCDC117-206ENST00000453543 BACH1O14867 736 aa34.05■■■■□ 3.04
CCDC117-206ENST00000453543 GRIN2CQ14957 1233 aa34.05■■■■□ 3.04
CCDC117-206ENST00000453543 CHD7Q9P2D1 2997 aa34.05■■■■□ 3.04
CCDC117-206ENST00000453543 MSH4O15457 936 aa34.04■■■■□ 3.04
CCDC117-206ENST00000453543 FDPSP14324 419 aaKnown RBP34.04■■■■□ 3.04
CCDC117-206ENST00000453543 WDR5P61964 334 aaKnown RBP34.04■■■■□ 3.04
CCDC117-206ENST00000453543 MIS18BP1Q6P0N0 1132 aa34.04■■■■□ 3.04
CCDC117-206ENST00000453543 PCDHA11Q9Y5I1 949 aa34.04■■■■□ 3.04
CCDC117-206ENST00000453543 EYSQ5T1H1 3165 aa34.03■■■■□ 3.04
CCDC117-206ENST00000453543 TDP2O95551 362 aa34.03■■■■□ 3.04
CCDC117-206ENST00000453543 ZNF746Q6NUN9 644 aaPredicted RBP34.03■■■■□ 3.04
CCDC117-206ENST00000453543 TAF2Q6P1X5 1199 aa34.03■■■■□ 3.04
CCDC117-206ENST00000453543 NSUN7Q8NE18 718 aaKnown RBP34.03■■■■□ 3.04
CCDC117-206ENST00000453543 PHOSPHO2Q8TCD6 241 aa34.03■■■■□ 3.04
CCDC117-206ENST00000453543 TRAPPC12Q8WVT3 735 aa34.03■■■■□ 3.04
CCDC117-206ENST00000453543 POTEB3A0JP26 581 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 RRN3P2A6NIE6 340 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 XBP1P17861 261 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 KCNJ6P48051 423 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 DEFB103AP81534 67 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 ST3GAL1Q11201 340 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 NONOQ15233 471 aaKnown RBP eCLIP34.02■■■■□ 3.04
CCDC117-206ENST00000453543 FAM160B1Q5W0V3 765 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 SWSAP1Q6NVH7 229 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 POTEBQ6S5H4 581 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 KRT25Q7Z3Z0 450 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 DBF4BQ8NFT6 615 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 KIF2CQ99661 725 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 ZNF302Q9NR11 478 aa34.02■■■■□ 3.04
CCDC117-206ENST00000453543 ABHD14A-ACY1A0A1B0GW23 586 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 SLC26A2P50443 739 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 KRT76Q01546 638 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 PLEKHG4Q58EX7 1191 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 FAM26DQ5JW98 314 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 PDXDC2PQ6P474 469 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 TMCO2Q7Z6W1 182 aaPredicted RBP34.01■■■■□ 3.03
CCDC117-206ENST00000453543 RPAINQ86UA6 219 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 HERC6Q8IVU3 1022 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 OXER1Q8TDS5 423 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 DNAJB3Q8WWF6 145 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 SLC28A3Q9HAS3 691 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 TCEAL9Q9UHQ7 104 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 SIP14410 1827 aa34.01■■■■□ 3.03
CCDC117-206ENST00000453543 JAK2O60674 1132 aa34■■■■□ 3.03
CCDC117-206ENST00000453543 IKBKEQ14164 716 aa34■■■■□ 3.03
CCDC117-206ENST00000453543 INF2Q27J81 1249 aa34■■■■□ 3.03
CCDC117-206ENST00000453543 WASF1Q92558 559 aa34■■■■□ 3.03
CCDC117-206ENST00000453543 SLC5A5Q92911 643 aa34■■■■□ 3.03
CCDC117-206ENST00000453543 GJA10Q969M2 543 aa34■■■■□ 3.03
CCDC117-206ENST00000453543 CYP3A7-CYP3A51PA0A087WV96 503 aa33.99■■■■□ 3.03
CCDC117-206ENST00000453543 CHRNA1P02708 482 aa33.99■■■■□ 3.03
CCDC117-206ENST00000453543 CYP3A7P24462 503 aa33.99■■■■□ 3.03
CCDC117-206ENST00000453543 Q4G0T1 1027 aa33.99■■■■□ 3.03
CCDC117-206ENST00000453543 SMAP1Q8IYB5 467 aaPredicted RBP33.99■■■■□ 3.03
CCDC117-206ENST00000453543 ATP8B4Q8TF62 1192 aa33.99■■■■□ 3.03
CCDC117-206ENST00000453543 TNPO1Q92973 898 aaKnown RBP33.99■■■■□ 3.03
CCDC117-206ENST00000453543 MICAL3Q7RTP6 2002 aa33.98■■■■□ 3.03
CCDC117-206ENST00000453543 ATP4AP20648 1035 aa33.98■■■■□ 3.03
CCDC117-206ENST00000453543 MGAT3Q09327 533 aa33.98■■■■□ 3.03
CCDC117-206ENST00000453543 RIT2Q99578 217 aa33.98■■■■□ 3.03
CCDC117-206ENST00000453543 CCDC194A0A1B0GVG4 234 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms