RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZNF467Q7Z7K2 595 aaPredicted RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 GIMAP8Q8ND71 665 aaPredicted RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 BANK1Q8NDB2 785 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 RDM1Q8NG50 284 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 NPLOC4Q8TAT6 608 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 PIGOQ8TEQ8 1089 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 USP6NLQ92738 828 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 DDX12PQ92771 950 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 NACC1Q96RE7 527 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 LXNQ9BS40 222 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 LRRC27Q9C0I9 530 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 KATNBL1Q9H079 304 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 ZFYVE28Q9HCC9 887 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 RMND1Q9NWS8 449 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SLC9A2Q9UBY0 812 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 DDX41Q9UJV9 622 aaKnown RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 DIS3Q9Y2L1 958 aaKnown RBP6.7□□□□□ -1.34
SDC4P-201ENST00000453285 GDAQ9Y2T3 454 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SIP14410 1827 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 SYNGAP1Q96PV0 1343 aa6.7□□□□□ -1.34
SDC4P-201ENST00000453285 IGKV6D-21A0A0A0MT36 114 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 NPHP3-ACAD11A0A0J9YXS1 232 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 GSTTP1A0A1W2PQM5 241 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 FRMD3A2A2Y4 597 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ASB14A6NK59 587 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 WDR64B1ANS9 1081 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 CA12O43570 354 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ZNF862O60290 1169 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 AOC2O75106 756 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 FARP2O94887 1054 aaPredicted RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 SNAI1O95863 264 aaPredicted RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 IGHA2P01877 340 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 UBA1P22314 1058 aaKnown RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ERCC5P28715 1186 aaPredicted RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 CTGFP29279 349 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 PRCPP42785 496 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 QARSP47897 775 aaKnown RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 APLP1P51693 650 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ACTR2P61160 394 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 PSMC5P62195 406 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ASIC1P78348 528 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 STK4Q13043 487 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 CRHR2Q13324 411 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 DEFB115Q30KQ5 88 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 COBLL1Q53SF7 1204 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 TMEM63BQ5T3F8 832 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 RINT1Q6NUQ1 792 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 KCNV1Q6PIU1 500 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 C1orf186Q6ZWK4 172 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ARMCX2Q7L311 632 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 CYFIP1Q7L576 1253 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 EEPD1Q7L9B9 569 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 GPBP1Q86WP2 473 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 C4orf19Q8IY42 314 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 SMAP1Q8IYB5 467 aaPredicted RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ADSSL1Q8N142 457 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 AOPEPQ8N6M6 819 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 KIAA0895Q8NCT3 520 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ENOX1Q8TC92 643 aaKnown RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 HPS3Q969F9 1004 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 MAML3Q96JK9 1138 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 PPP1R9BQ96SB3 815 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 MPHOSPH6Q99547 160 aaKnown RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 NAT10Q9H0A0 1025 aaKnown RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 BHMT2Q9H2M3 363 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 ZSWIM4Q9H7M6 989 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 PDGFCQ9NRA1 345 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 CREBZFQ9NS37 354 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 DBR1Q9UK59 544 aaKnown RBP6.69□□□□□ -1.34
SDC4P-201ENST00000453285 GJD2Q9UKL4 321 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 PCDHA10Q9Y5I2 948 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 IVNS1ABPQ9Y6Y0 642 aa6.69□□□□□ -1.34
SDC4P-201ENST00000453285 THSD7BQ9C0I4 1608 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 SMTNL1A8MU46 457 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 SORBS3O60504 671 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 PSAPP07602 524 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 HOXC6P09630 235 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 SUPT20HL2P0C7V6 817 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 ATP4AP20648 1035 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 RARRES1P49788 294 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 MYL5Q02045 173 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 CACNB1Q02641 598 aaPredicted RBP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 COASYQ13057 564 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 MAP2K5Q13163 448 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 MAPK7Q13164 816 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 PSMD2Q13200 908 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 NOGQ13253 232 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 NEDD9Q14511 834 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 LY6KQ17RY6 165 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 CELF3Q5SZQ8 465 aaKnown RBP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 COL13A1Q5TAT6 717 aaPredicted RBP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 SWSAP1Q6NVH7 229 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 DPP9Q86TI2 863 aa6.68□□□□□ -1.34
SDC4P-201ENST00000453285 CCDC60Q8IWA6 550 aaPredicted RBP6.68□□□□□ -1.34
SDC4P-201ENST00000453285 FBXO16Q8IX29 292 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms