RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 OSBPL7Q9BZF2 842 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 NSUN3Q9H649 340 aaKnown RBP12.49□□□□□ -0.41
USP1-204ENST00000452143 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
USP1-204ENST00000452143 TELO2Q9Y4R8 837 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 UBIAD1Q9Y5Z9 338 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 SLC12A7Q9Y666 1083 aa12.49□□□□□ -0.41
USP1-204ENST00000452143 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 PI4K2BG5E9Z4 385 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 NCK2O43639 380 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 ATP9AO75110 1047 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 RB1P06400 928 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 GHRP10912 638 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 LPIN1Q14693 890 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 GRIK4Q16099 956 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 PTCRAQ6ISU1 281 aaPredicted RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 RUFY4Q6ZNE9 571 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 TSHZ1Q6ZSZ6 1077 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 GJD3Q8N144 294 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 GLG1Q92896 1179 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 C11orf84Q9BUA3 381 aaPredicted RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 JPH1Q9HDC5 661 aaPredicted RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 FAM50BQ9Y247 325 aa12.48□□□□□ -0.41
USP1-204ENST00000452143 SUPT16HQ9Y5B9 1047 aaKnown RBP12.48□□□□□ -0.41
USP1-204ENST00000452143 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 SLC27A2O14975 620 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 RXRAP19793 462 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 MARK3P27448 753 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 CTNNB1P35222 781 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 FBXO47Q5MNV8 452 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
USP1-204ENST00000452143 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.41
USP1-204ENST00000452143 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
USP1-204ENST00000452143 FTHL17Q9BXU8 183 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 AZI2Q9H6S1 392 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 CD320Q9NPF0 282 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 C11orf16Q9NQ32 467 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 JADE2Q9NQC1 790 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 PCDHA6Q9UN73 950 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 PCDHA8Q9Y5H6 950 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 SQORQ9Y6N5 450 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 C5orf42Q9H799 3197 aa12.47□□□□□ -0.41
USP1-204ENST00000452143 NFASCO94856 1347 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 RBAK-RBAKDNI3L0D1 243 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 LINC00271P0C7V0 271 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 ALADP13716 330 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 IL9P15248 144 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 BMPR1AP36894 532 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 MRPS6P82932 125 aaKnown RBP12.46□□□□□ -0.41
USP1-204ENST00000452143 NECTIN1Q15223 517 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 UBE2SQ16763 222 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 IER5Q5VY09 327 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 FAM43BQ6ZT52 329 aaPredicted RBP12.46□□□□□ -0.41
USP1-204ENST00000452143 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 MICU3Q86XE3 530 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.41
USP1-204ENST00000452143 DNAJB3Q8WWF6 145 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 ZNF689Q96CS4 500 aaPredicted RBP12.46□□□□□ -0.41
USP1-204ENST00000452143 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 PLVAPQ9BX97 442 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 KCNH7Q9NS40 1196 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.41
USP1-204ENST00000452143 SLC9A2Q9UBY0 812 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 PRKAG3Q9UGI9 489 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 CDY2AQ9Y6F7 541 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 TRIOO75962 3097 aa12.46□□□□□ -0.41
USP1-204ENST00000452143 PRR33A8MZF0 331 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
USP1-204ENST00000452143 M0QZ92 97 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 FOSP01100 380 aaPredicted RBP12.45□□□□□ -0.42
USP1-204ENST00000452143 SSTR3P32745 418 aaPredicted RBP12.45□□□□□ -0.42
USP1-204ENST00000452143 SLC26A2P50443 739 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
USP1-204ENST00000452143 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 SYNE3Q6ZMZ3 975 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 PLPPR4Q7Z2D5 763 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 METRNQ9UJH8 293 aa12.45□□□□□ -0.42
USP1-204ENST00000452143 IGSF9BQ9UPX0 1349 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 hCG_1642624A0A1W2PR95 340 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 ENPP3O14638 875 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 DGKIO75912 1065 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 MMP1P03956 469 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms