RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 SND1Q7KZF4 910 aaKnown RBP eCLIP24.39■■□□□ 1.51e-6■□□□□ 8.4
TTC3-210ENST00000450533 FAM184BQ9ULE4 1060 aa24.39■■□□□ 1.5
TTC3-210ENST00000450533 DNM3Q9UQ16 869 aa24.39■■□□□ 1.5
TTC3-210ENST00000450533 SPDYE3A6NKU9 549 aa24.39■■□□□ 1.49
TTC3-210ENST00000450533 AGPSO00116 658 aa24.39■■□□□ 1.49
TTC3-210ENST00000450533 ITIH3Q06033 890 aa24.39■■□□□ 1.49
TTC3-210ENST00000450533 FBXO11Q86XK2 927 aa24.39■■□□□ 1.49
TTC3-210ENST00000450533 RNF10Q8N5U6 811 aaKnown RBP24.39■■□□□ 1.49
TTC3-210ENST00000450533 HDAC9Q9UKV0 1011 aa24.39■■□□□ 1.49
TTC3-210ENST00000450533 PACSIN2Q9UNF0 486 aaPredicted RBP24.39■■□□□ 1.49
TTC3-210ENST00000450533 PITPNM2Q9BZ72 1349 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 RSPH10B2B2RC85 870 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 NDUFB10O96000 172 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 RSPH10BP0C881 870 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 MYBP10242 640 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 SLC9A1P19634 815 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 SLC18A3Q16572 532 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 GANQ9H2C0 597 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 PLEKHA4Q9H4M7 779 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 HOXD13P35453 343 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 JAG1P78504 1218 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 KIAA0753Q2KHM9 967 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 SLC30A10Q6XR72 485 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 ARHGAP27Q6ZUM4 889 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 PODNQ7Z5L7 613 aa24.38■■□□□ 1.49
TTC3-210ENST00000450533 COL23A1Q86Y22 540 aaPredicted RBP24.38■■□□□ 1.49
TTC3-210ENST00000450533 EDRF1Q3B7T1 1238 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 SPICE1Q8N0Z3 855 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 ERMNQ8TAM6 284 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 NRXN2Q9P2S2 1712 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 RPA1P27694 616 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 ASIC2Q16515 512 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 ABCB5Q2M3G0 1257 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 TATDN1Q6P1N9 297 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 MOXD1Q6UVY6 613 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 ZC3H3Q8IXZ2 948 aaKnown RBP24.37■■□□□ 1.49
TTC3-210ENST00000450533 AFAP1L1Q8TED9 768 aa24.37■■□□□ 1.49
TTC3-210ENST00000450533 NAB2Q15742 525 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 KNOP1Q1ED39 458 aaKnown RBP24.36■■□□□ 1.49
TTC3-210ENST00000450533 PPP4R3CPQ6ZMV5 832 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 TMEM179Q6ZVK1 233 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 DNAAF5Q86Y56 855 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 NLGN1Q8N2Q7 840 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 GOLGA6L1Q8N7Z2 621 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 SYT2Q8N9I0 419 aaPredicted RBP24.36■■□□□ 1.49
TTC3-210ENST00000450533 ZFP91Q96JP5 570 aaPredicted RBP24.36■■□□□ 1.49
TTC3-210ENST00000450533 BHMT2Q9H2M3 363 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 STIM2Q9P246 746 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 ARMCX3Q9UH62 379 aaPredicted RBP24.36■■□□□ 1.49
TTC3-210ENST00000450533 GOLGA6BA6NDN3 693 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 MSH4O15457 936 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 MMP10P09238 476 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 Q4G0T1 1027 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 DCAF17Q5H9S7 520 aaPredicted RBP24.36■■□□□ 1.49
TTC3-210ENST00000450533 SYDE2Q5VT97 1194 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 C8orf74Q6P047 294 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 FOXR1Q6PIV2 292 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 AIPL1Q9NZN9 384 aa24.36■■□□□ 1.49
TTC3-210ENST00000450533 RNASE9P60153 205 aaKnown RBP24.35■■□□□ 1.49
TTC3-210ENST00000450533 MSL1Q68DK7 614 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 MASTLQ96GX5 879 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 IDI2Q9BXS1 227 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 LUC7LQ9NQ29 371 aaKnown RBP24.35■■□□□ 1.49
TTC3-210ENST00000450533 RGL1Q9NZL6 768 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 OPLAHO14841 1288 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 GH2P01242 217 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 PDE6BP35913 854 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 SREBF1P36956 1147 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 KCNA1Q09470 495 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 CFAP221Q4G0U5 840 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 DACT2Q5SW24 774 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 RUSC1Q9BVN2 902 aa24.35■■□□□ 1.49
TTC3-210ENST00000450533 TDRD3Q9H7E2 651 aaKnown RBP24.35■■□□□ 1.49
TTC3-210ENST00000450533 SFI1A8K8P3 1242 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 PTK2Q05397 1052 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 TCERG1LQ5VWI1 586 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 TRAF3IP3Q9Y228 551 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 ECE2O60344 883 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 AKAP3O75969 853 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 ZNF76P36508 570 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 SPAG5Q96R06 1193 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 IKZF4Q9H2S9 585 aa24.34■■□□□ 1.49
TTC3-210ENST00000450533 QTRT2Q9H974 415 aaKnown RBP24.34■■□□□ 1.49
TTC3-210ENST00000450533 EML1O00423 815 aa24.33■■□□□ 1.49
TTC3-210ENST00000450533 TBX3O15119 743 aa24.33■■□□□ 1.49
TTC3-210ENST00000450533 CASP4P49662 377 aa24.33■■□□□ 1.49
TTC3-210ENST00000450533 RRP1BQ14684 758 aaKnown RBP24.33■■□□□ 1.49
TTC3-210ENST00000450533 STRIP1Q5VSL9 837 aa24.33■■□□□ 1.49
TTC3-210ENST00000450533 EPM2AIP1Q7L775 607 aaPredicted RBP24.33■■□□□ 1.49
TTC3-210ENST00000450533 COL11A2P13942 1736 aaPredicted RBP24.33■■□□□ 1.48
TTC3-210ENST00000450533 SMCHD1A6NHR9 2005 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 CLIC2O15247 247 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 SLC26A4O43511 780 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 AFPP02771 609 aaKnown RBP24.33■■□□□ 1.48
TTC3-210ENST00000450533 BMP3P12645 472 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 UCHL3P15374 230 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 KRT27Q7Z3Y8 459 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 TSKSQ9UJT2 592 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 VAV3Q9UKW4 847 aa24.33■■□□□ 1.48
TTC3-210ENST00000450533 SCN9AQ15858 1988 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms