RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 POSTNQ15063 836 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 PLCB4Q15147 1175 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 FAM163AQ96GL9 167 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SLC32A1Q9H598 525 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SLC9A2Q9UBY0 812 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 IQUBQ8NA54 791 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SEZ6LQ9BYH1 1024 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 JPH1Q9HDC5 661 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SHTN1A0MZ66 631 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 VWA3AA6NCI4 1184 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SLU7O95391 586 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 TNNI1P19237 187 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 ARID5BQ14865 1188 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 FAM114A1Q8IWE2 563 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 PLIN2Q99541 437 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 STX10O60499 249 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 KRT10P13645 584 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 YWHAEP62258 255 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ELF2Q15723 593 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 SPATA6Q9NWH7 488 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 C10orf71Q711Q0 1435 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CD19P15391 556 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 GPM6BQ13491 265 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PLPP4Q5VZY2 271 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CYFIP1Q7L576 1253 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CLEC10AQ8IUN9 316 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZSCAN1Q8NBB4 408 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 MCPH1Q8NEM0 835 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 UCMAQ8WVF2 138 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 SRPK1Q96SB4 655 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 KLF15Q9UIH9 416 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 SH3BP1Q9Y3L3 701 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 APC2O95996 2303 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 HNRNPDLO14979 420 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 MAFGO15525 162 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ORC4O43929 436 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PARNO95453 639 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 RPS6KB1P23443 525 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 GJB2P29033 226 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 OAZ1P54368 228 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC15Q0P6D6 951 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 NFKBIBQ15653 356 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 RUFY3Q7L099 469 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 FBXO16Q8IX29 292 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 IPO9Q96P70 1041 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZSWIM4Q9H7M6 989 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 TMEM260Q9NX78 707 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PIN4Q9Y237 131 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 AK5Q9Y6K8 562 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ESYT2A0FGR8 921 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 RASSF10A6NK89 507 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 TTLL13PA6NNM8 815 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 GPR182O15218 404 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 MAPK6Q16659 721 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 TMEM31Q5JXX7 168 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PPM1LQ5SGD2 360 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CXCL17Q6UXB2 119 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 HHIPL1Q96JK4 782 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 BRD9Q9H8M2 597 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 DDX20Q9UHI6 824 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PCDHA6Q9UN73 950 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PCDHA8Q9Y5H6 950 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PDS5AQ29RF7 1337 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 STAM2O75886 525 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 RPS6P62753 249 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 TAF2Q6P1X5 1199 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CACTINQ8WUQ7 758 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PSMA7O14818 248 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 EXOC3O60645 756 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CFIP05156 583 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRAMEF19Q5SWL8 479 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 BRAPQ7Z569 592 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 DAAM2Q86T65 1068 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 IFNLR1Q8IU57 520 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 CERS5Q8N5B7 392 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 AGBL1Q96MI9 1066 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 GTPBP2Q9BX10 602 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 PCDHA10Q9Y5I2 948 aa6.19□□□□□ -1.42
CDC42BPA-209ENST00000448940 ICAM1P05362 532 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF543Q08ER8 600 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SWSAP1Q6NVH7 229 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 OTOP1Q7RTM1 612 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC26Q8TAB7 109 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 SPAG5Q96R06 1193 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 YIPF2Q9BWQ6 316 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 HESX1Q9UBX0 185 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 POTEB3A0JP26 581 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 TBC1D12O60347 775 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 POTEBQ6S5H4 581 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 NT5DC4Q86YG4 428 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 FAM178BQ8IXR5 827 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 HLA-CQ95604 372 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 STIM2Q9P246 746 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 K7ERI5 159 aa6.18□□□□□ -1.42
CDC42BPA-209ENST00000448940 AGRPO00253 132 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms