RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 IGBP1P78318 339 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 LPIN1Q14693 890 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 RNF20Q5VTR2 975 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 RUFY4Q6ZNE9 571 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 TSHZ1Q6ZSZ6 1077 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 HEATR3Q7Z4Q2 680 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 GLT8D2Q9H1C3 349 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
HMGB3-204ENST00000448905 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 CLDND1Q9NY35 253 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 PKD2L1Q9P0L9 805 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
HMGB3-204ENST00000448905 KIAA1217Q5T5P2 1943 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 FAM86C2PA6NEL3 165 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 PRR33A8MZF0 331 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 SLC27A2O14975 620 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 INSRRP14616 1297 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 IL9P15248 144 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 MRPS6P82932 125 aaKnown RBP15.2■□□□□ 0.02
HMGB3-204ENST00000448905 NAALADL2Q58DX5 795 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 FBXO47Q5MNV8 452 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 PLPPR4Q7Z2D5 763 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 MXRA8Q9BRK3 442 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 RBM28Q9NW13 759 aaKnown RBP15.2■□□□□ 0.02
HMGB3-204ENST00000448905 TRPC6Q9Y210 931 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 TELO2Q9Y4R8 837 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 CDY2AQ9Y6F7 541 aa15.2■□□□□ 0.02
HMGB3-204ENST00000448905 RXRAP19793 462 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 ZNF76P36508 570 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 SLC26A2P50443 739 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 STAT5BP51692 787 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 MGAT3Q09327 533 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 UBE2SQ16763 222 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 ODR4Q5SWX8 454 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 MARCH8Q5T0T0 291 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 CLP1Q92989 425 aaKnown RBP15.19■□□□□ 0.02
HMGB3-204ENST00000448905 UIMC1Q96RL1 719 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
HMGB3-204ENST00000448905 FAM49AQ9H0Q0 323 aaPredicted RBP15.19■□□□□ 0.02
HMGB3-204ENST00000448905 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 KCNH7Q9NS40 1196 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 PCDHA2Q9Y5H9 948 aa15.19■□□□□ 0.02
HMGB3-204ENST00000448905 ADGRA3Q8IWK6 1321 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 hCG_1642624A0A1W2PR95 340 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 DGKIO75912 1065 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 NAPAP54920 295 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 COL19A1Q14993 1142 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 TMTC3Q6ZXV5 915 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 SGMS1Q86VZ5 419 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 ZNF689Q96CS4 500 aaPredicted RBP15.18■□□□□ 0.02
HMGB3-204ENST00000448905 LSG1Q9H089 658 aaKnown RBP15.18■□□□□ 0.02
HMGB3-204ENST00000448905 RIC8AQ9NPQ8 531 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 BDP1A6H8Y1 2624 aa15.18■□□□□ 0.02
HMGB3-204ENST00000448905 MYH6P13533 1939 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 POTEB3A0JP26 581 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 GRM6O15303 877 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 DCXO43602 365 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 CD52P31358 61 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 ACTR2P61160 394 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 PAK2Q13177 524 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 CEP55Q53EZ4 464 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 POTEBQ6S5H4 581 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 MICU3Q86XE3 530 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 NPAS4Q8IUM7 802 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 ADHFE1Q8IWW8 467 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 CMTR2Q8IYT2 770 aaKnown RBP15.17■□□□□ 0.02
HMGB3-204ENST00000448905 P2RX5Q93086 422 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 CELF4Q9BZC1 486 aaKnown RBP15.17■□□□□ 0.02
HMGB3-204ENST00000448905 IGFLR1Q9H665 355 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 C11orf16Q9NQ32 467 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 PLAGL2Q9UPG8 496 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 TRPV2Q9Y5S1 764 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 V9GY48 417 aaPredicted RBP15.17■□□□□ 0.02
HMGB3-204ENST00000448905 NFASCO94856 1347 aa15.17■□□□□ 0.02
HMGB3-204ENST00000448905 NCOR1O75376 2440 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 SMIM35A0A1B0GVV1 85 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 SMCO2A6NFE2 343 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 hCG_1984214I3L0E3 225 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 ADCY7P51828 1080 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 KRT76Q01546 638 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 CTC1Q2NKJ3 1217 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 FAM160B1Q5W0V3 765 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 PPP1R18Q6NYC8 613 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 RAB11FIP4Q86YS3 637 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 ZNF713Q8N859 430 aaPredicted RBP15.16■□□□□ 0.02
HMGB3-204ENST00000448905 LRRC2Q9BYS8 371 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 AGO3Q9H9G7 860 aaKnown RBP15.16■□□□□ 0.02
HMGB3-204ENST00000448905 PADI3Q9ULW8 664 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 PCDHB7Q9Y5E2 793 aa15.16■□□□□ 0.02
HMGB3-204ENST00000448905 MEIS1O00470 390 aa15.15■□□□□ 0.02
HMGB3-204ENST00000448905 BACH1O14867 736 aa15.15■□□□□ 0.02
HMGB3-204ENST00000448905 ZBTB43O43298 467 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms