RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
CHRD-205ENST00000448472 ECM1Q16610 540 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 ISCUQ9H1K1 167 aa17.28■□□□□ 0.36
CHRD-205ENST00000448472 PLTPP55058 493 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 PSMD2Q13200 908 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 SNCBQ16143 134 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 N4BP2L2Q92802 583 aaPredicted RBP17.27■□□□□ 0.36
CHRD-205ENST00000448472 ODF2LQ9ULJ1 636 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 LCA5LO95447 670 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 PDHBP11177 359 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 EZRP15311 586 aaKnown RBP17.27■□□□□ 0.36
CHRD-205ENST00000448472 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
CHRD-205ENST00000448472 QPCTQ16769 361 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 ASTE1Q2TB18 679 aaPredicted RBP17.27■□□□□ 0.36
CHRD-205ENST00000448472 ZNF571Q7Z3V5 609 aaPredicted RBP17.27■□□□□ 0.36
CHRD-205ENST00000448472 PROM2Q8N271 834 aa17.27■□□□□ 0.36
CHRD-205ENST00000448472 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
CHRD-205ENST00000448472 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.35
CHRD-205ENST00000448472 DCDC2CA8MYV0 355 aa17.27■□□□□ 0.35
CHRD-205ENST00000448472 GBP2P32456 591 aaPredicted RBP17.27■□□□□ 0.35
CHRD-205ENST00000448472 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.35
CHRD-205ENST00000448472 KCTD1Q719H9 257 aa17.27■□□□□ 0.35
CHRD-205ENST00000448472 LMBR1Q8WVP7 490 aa17.27■□□□□ 0.35
CHRD-205ENST00000448472 TCP11Q8WWU5 503 aa17.27■□□□□ 0.35
CHRD-205ENST00000448472 POTEFA5A3E0 1075 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 SFI1A8K8P3 1242 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 CLTAP09496 248 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 ZNF844Q08AG5 666 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 CUL1Q13616 776 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 HIBCHQ6NVY1 386 aaPredicted RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 POTEGQ6S5H5 508 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 TRMT1LQ7Z2T5 733 aaKnown RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 ZNF572Q7Z3I7 529 aaPredicted RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 SEC16BQ96JE7 1060 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 EDEM3Q9BZQ6 932 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 NEUROG2Q9H2A3 272 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 FSBPO95073 299 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 GNA14O95837 355 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 ARHGAP44Q17R89 818 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 TTBK2Q6IQ55 1244 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 MARCH10Q8NA82 808 aaPredicted RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 MGARPQ8TDB4 240 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 PBKQ96KB5 322 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 BUB1BO60566 1050 aaPredicted RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 GCNT3O95395 438 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 MKRN4PQ13434 485 aaPredicted RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 MTMR3Q13615 1198 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 SWT1Q5T5J6 900 aaKnown RBP17.26■□□□□ 0.35
CHRD-205ENST00000448472 RDH13Q8NBN7 331 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 RAPGEF5Q92565 580 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.26■□□□□ 0.356e-7■■■□□ 15.1
CHRD-205ENST00000448472 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 GGT7Q9UJ14 662 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 AMFRQ9UKV5 643 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
CHRD-205ENST00000448472 UCHL3P15374 230 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 HSPA9P38646 679 aaKnown RBP17.25■□□□□ 0.35
CHRD-205ENST00000448472 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 TNFRSF8P28908 595 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 USP11P51784 963 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 PPP4R3AQ6IN85 833 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 KIRREL3Q8IZU9 778 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 FMO2Q99518 471 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 PLCB1Q9NQ66 1216 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 SNX24Q9Y343 169 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 CD2APQ9Y5K6 639 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 MYH3P11055 1940 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 AFPP02771 609 aaKnown RBP17.25■□□□□ 0.35
CHRD-205ENST00000448472 PLS1Q14651 629 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 FAM133BQ5BKY9 247 aaKnown RBP17.25■□□□□ 0.35
CHRD-205ENST00000448472 CUL5Q93034 780 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 NT5C3AQ9H0P0 336 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 NAGPAQ9UK23 515 aa17.25■□□□□ 0.35
CHRD-205ENST00000448472 NEDD9Q14511 834 aa17.24■□□□□ 0.35
CHRD-205ENST00000448472 MTMR9Q96QG7 549 aa17.24■□□□□ 0.35
CHRD-205ENST00000448472 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
CHRD-205ENST00000448472 GOLGA6L10A0A0M3HER8 536 aa17.24■□□□□ 0.35
CHRD-205ENST00000448472 TBCAO75347 108 aaKnown RBP17.24■□□□□ 0.35
CHRD-205ENST00000448472 FNTAP49354 379 aa17.24■□□□□ 0.35
CHRD-205ENST00000448472 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHRD-205ENST00000448472 NAA25Q14CX7 972 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms