RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MBLAC1A4D2B0 266 aaPredicted RBP32.33■■■□□ 2.77
CBX4-202ENST00000448310 STXBP3O00186 592 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 CDC45O75419 566 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 ARP10275 920 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 LPIN1Q14693 890 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 TSGA10IPQ3SY00 556 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 PPP1R18Q6NYC8 613 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 ANO3Q9BYT9 981 aa32.33■■■□□ 2.77
CBX4-202ENST00000448310 FAM217BQ9NTX9 383 aaPredicted RBP32.33■■■□□ 2.77
CBX4-202ENST00000448310 COL4A6Q14031 1691 aa32.32■■■□□ 2.76
CBX4-202ENST00000448310 INSRRP14616 1297 aa32.32■■■□□ 2.76
CBX4-202ENST00000448310 CDC27P30260 824 aa32.32■■■□□ 2.76
CBX4-202ENST00000448310 RSPH3Q86UC2 560 aa32.32■■■□□ 2.76
CBX4-202ENST00000448310 FAM49AQ9H0Q0 323 aaPredicted RBP32.32■■■□□ 2.76
CBX4-202ENST00000448310 NAP1L2Q9ULW6 460 aaPredicted RBP32.32■■■□□ 2.76
CBX4-202ENST00000448310 CDY2AQ9Y6F7 541 aa32.32■■■□□ 2.76
CBX4-202ENST00000448310 SMCO2A6NFE2 343 aa32.31■■■□□ 2.76
CBX4-202ENST00000448310 CPA1P15085 419 aa32.31■■■□□ 2.76
CBX4-202ENST00000448310 SAMD11Q96NU1 681 aa32.31■■■□□ 2.76
CBX4-202ENST00000448310 SDF4Q9BRK5 362 aa32.31■■■□□ 2.76
CBX4-202ENST00000448310 COL9A1P20849 921 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 ACTR2P61160 394 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 ITGB3BPQ13352 177 aaPredicted RBP32.3■■■□□ 2.76
CBX4-202ENST00000448310 TMEM192Q8IY95 271 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 AZI2Q9H6S1 392 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 UBE2ZQ9H832 354 aaPredicted RBP32.3■■■□□ 2.76
CBX4-202ENST00000448310 BARHL2Q9NY43 387 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 TRPC6Q9Y210 931 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 MYO7AQ13402 2215 aa32.3■■■□□ 2.76
CBX4-202ENST00000448310 NFASCO94856 1347 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 FOSP01100 380 aaPredicted RBP32.29■■■□□ 2.76
CBX4-202ENST00000448310 GPM6BQ13491 265 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 KRT32Q14532 448 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 CEP55Q53EZ4 464 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 FBXO47Q5MNV8 452 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 TRAPPC12Q8WVT3 735 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 MRPL38Q96DV4 380 aaKnown RBP32.29■■■□□ 2.76
CBX4-202ENST00000448310 AGO4Q9HCK5 861 aaKnown RBP32.29■■■□□ 2.76
CBX4-202ENST00000448310 ATG2AQ2TAZ0 1938 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 TTC3P53804 2025 aa32.29■■■□□ 2.76
CBX4-202ENST00000448310 RRN3P2A6NIE6 340 aa32.28■■■□□ 2.76
CBX4-202ENST00000448310 MRPS6P82932 125 aaKnown RBP32.28■■■□□ 2.76
CBX4-202ENST00000448310 PLCB4Q15147 1175 aa32.28■■■□□ 2.76
CBX4-202ENST00000448310 IL17RAQ96F46 866 aa32.28■■■□□ 2.76
CBX4-202ENST00000448310 RAPGEFL1Q9UHV5 662 aa32.28■■■□□ 2.76
CBX4-202ENST00000448310 H3BNC9 293 aa32.27■■■□□ 2.76
CBX4-202ENST00000448310 hCG_1984214I3L0E3 225 aa32.27■■■□□ 2.76
CBX4-202ENST00000448310 SREBF1P36956 1147 aa32.27■■■□□ 2.76
CBX4-202ENST00000448310 CLK2P49760 499 aaKnown RBP32.27■■■□□ 2.76
CBX4-202ENST00000448310 ZNF713Q8N859 430 aaPredicted RBP32.27■■■□□ 2.76
CBX4-202ENST00000448310 AGO3Q9H9G7 860 aaKnown RBP32.27■■■□□ 2.76
CBX4-202ENST00000448310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP32.26■■■□□ 2.75
CBX4-202ENST00000448310 DDX39AO00148 427 aaKnown RBP32.26■■■□□ 2.75
CBX4-202ENST00000448310 ENPP3O14638 875 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 KCNA5P22460 613 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 ADD1P35611 737 aaKnown RBP32.26■■■□□ 2.75
CBX4-202ENST00000448310 STAT5BP51692 787 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 FGD1P98174 961 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 TMEM62Q0P6H9 643 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 AP3B2Q13367 1082 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 PTPROQ16827 1216 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 JAKMIP3Q5VZ66 844 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 TSHZ1Q6ZSZ6 1077 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 FIBCD1Q8N539 461 aa32.26■■■□□ 2.75
CBX4-202ENST00000448310 MEIS1O00470 390 aa32.25■■■□□ 2.75
CBX4-202ENST00000448310 CD52P31358 61 aa32.25■■■□□ 2.75
CBX4-202ENST00000448310 ZNF76P36508 570 aa32.25■■■□□ 2.75
CBX4-202ENST00000448310 APOBRQ0VD83 1088 aa32.25■■■□□ 2.75
CBX4-202ENST00000448310 TEX2Q8IWB9 1127 aa32.25■■■□□ 2.75
CBX4-202ENST00000448310 METAP2P50579 478 aaKnown RBP eCLIP32.24■■■□□ 2.758e-7■□□□□ 9.4
CBX4-202ENST00000448310 PLPPR4Q7Z2D5 763 aa32.24■■■□□ 2.75
CBX4-202ENST00000448310 LINC01599Q8WXQ3 324 aa32.24■■■□□ 2.75
CBX4-202ENST00000448310 UIMC1Q96RL1 719 aa32.24■■■□□ 2.75
CBX4-202ENST00000448310 ADAMTS3O15072 1205 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 CCNE2O96020 404 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 HMGB1P09429 215 aaKnown RBP32.23■■■□□ 2.75
CBX4-202ENST00000448310 CTNNB1P35222 781 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 PFKFB3Q16875 520 aaPredicted RBP32.23■■■□□ 2.75
CBX4-202ENST00000448310 Q6ZUG5 572 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 BANK1Q8NDB2 785 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 GLT8D2Q9H1C3 349 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 RC3H2Q9HBD1 1191 aaKnown RBP32.23■■■□□ 2.75
CBX4-202ENST00000448310 TRPV2Q9Y5S1 764 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 ADGRA3Q8IWK6 1321 aa32.23■■■□□ 2.75
CBX4-202ENST00000448310 EVPLQ92817 2033 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 POTEB3A0JP26 581 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 FAM86B1E9PN63 330 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 FAM86B2P0C5J1 330 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 RCAN1P53805 252 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 TIGD5Q53EQ6 642 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 IER5Q5VY09 327 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 POTEBQ6S5H4 581 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 JAKMIP1Q96N16 626 aaKnown RBP32.22■■■□□ 2.75
CBX4-202ENST00000448310 PCDHA2Q9Y5H9 948 aa32.22■■■□□ 2.75
CBX4-202ENST00000448310 ATG7O95352 703 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 LINC00271P0C7V0 271 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 SCG2P13521 617 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 LEXMQ3ZCV2 418 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 TCEAL5Q5H9L2 206 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 PLA2G4DQ86XP0 818 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms