RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 FIGNQ5HY92 759 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 HLA-DQA1Q5Y7H0 255 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 PARD3BQ8TEW8 1205 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 SCARF2Q96GP6 870 aaPredicted RBP8□□□□□ -1.13
COL11A1-205ENST00000447608 ACAP3Q96P50 834 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 CD244Q9BZW8 370 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 EPB41L1Q9H4G0 881 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 ATG3Q9NT62 314 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 BSDC1Q9NW68 430 aaPredicted RBP8□□□□□ -1.13
COL11A1-205ENST00000447608 DSEQ9UL01 958 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 PLAGL2Q9UPG8 496 aa8□□□□□ -1.13
COL11A1-205ENST00000447608 A6NNZ2 444 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 CLASP2O75122 1294 aaKnown RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 TMEM253P0C7T8 217 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 C5AR1P21730 350 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 GRAMD1BQ3KR37 738 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 CC2D1AQ6P1N0 951 aaPredicted RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 CHST15Q7LFX5 561 aaPredicted RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 CATIPQ7Z7H3 387 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 PLEKHO2Q8TD55 490 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 FCRL2Q96LA5 508 aaPredicted RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 SLC2A13Q96QE2 648 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 RNF38Q9H0F5 515 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 QRSL1Q9H0R6 528 aaKnown RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 CSRNP2Q9H175 543 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 STOML1Q9UBI4 398 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 MSRAQ9UJ68 235 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 PHTF1Q9UMS5 762 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 COA3Q9Y2R0 106 aaPredicted RBP7.99□□□□□ -1.13
COL11A1-205ENST00000447608 PTPN22Q9Y2R2 807 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 GPR45Q9Y5Y3 372 aa7.99□□□□□ -1.13
COL11A1-205ENST00000447608 SH3BP5O60239 455 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ESR1P03372 595 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 F13BP05160 661 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 CEACAM5P06731 702 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 OSMP13725 252 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 AGXTP21549 392 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ENPP1P22413 925 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 CLCN7P51798 805 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ZNF280AP59817 542 aaPredicted RBP7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ADCY1Q08828 1119 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 HSP90AB4PQ58FF6 505 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 CT83Q5H943 113 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 TMPRSS7Q7RTY8 843 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ZZZ3Q8IYH5 903 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 MIER2Q8N344 545 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ZBTB34Q8NCN2 500 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.98□□□□□ -1.13
COL11A1-205ENST00000447608 SSBP4Q9BWG4 385 aaPredicted RBP7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ANO3Q9BYT9 981 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 GTPBP4Q9BZE4 634 aaKnown RBP7.98□□□□□ -1.13
COL11A1-205ENST00000447608 UBA5Q9GZZ9 404 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 SLC6A20Q9NP91 592 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 KCNH7Q9NS40 1196 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 RAXQ9Y2V3 346 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 RWDD3Q9Y3V2 267 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 ATP23Q9Y6H3 246 aa7.98□□□□□ -1.13
COL11A1-205ENST00000447608 RASSF10A6NK89 507 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 MYL3P08590 195 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 POU2F2P09086 479 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 CLEC2LP0C7M8 214 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 RHCEP18577 417 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 MTNR1BP49286 362 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 ADKP55263 362 aaKnown RBP7.97□□□□□ -1.13
COL11A1-205ENST00000447608 RHDQ02161 417 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 RALBP1Q15311 655 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 FSCN1Q16658 493 aaKnown RBP7.97□□□□□ -1.13
COL11A1-205ENST00000447608 ATAT1Q5SQI0 421 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 FAM83BQ5T0W9 1011 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 LILRA6Q6PI73 481 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 RBM12BQ8IXT5 1001 aaKnown RBP7.97□□□□□ -1.13
COL11A1-205ENST00000447608 NLGN4XQ8N0W4 816 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
COL11A1-205ENST00000447608 HPS3Q969F9 1004 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 ACO2Q99798 780 aaKnown RBP7.97□□□□□ -1.13
COL11A1-205ENST00000447608 SEMA4AQ9H3S1 761 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 MKNK2Q9HBH9 465 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 ATP13A1Q9HD20 1204 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 ZNF277Q9NRM2 450 aaPredicted RBP7.97□□□□□ -1.13
COL11A1-205ENST00000447608 EDARQ9UNE0 448 aa7.97□□□□□ -1.13
COL11A1-205ENST00000447608 FXR1P51114 621 aaKnown RBP eCLIP7.96□□□□□ -1.14
COL11A1-205ENST00000447608 MOGSQ13724 837 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 LLGL1Q15334 1064 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 ERAP2Q6P179 960 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 CXorf67Q86X51 503 aaPredicted RBP7.96□□□□□ -1.14
COL11A1-205ENST00000447608 SIRT2Q8IXJ6 389 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 GRAMD1CQ8IYS0 662 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 FAM43AQ8N2R8 423 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 VPS37AQ8NEZ2 397 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 DIS3LQ8TF46 1054 aaKnown RBP7.96□□□□□ -1.14
COL11A1-205ENST00000447608 EAF2Q96CJ1 260 aaPredicted RBP7.96□□□□□ -1.14
COL11A1-205ENST00000447608 C16orf92Q96LL3 132 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 JMJD8Q96S16 334 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 MTA3Q9BTC8 594 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 NAA15Q9BXJ9 866 aaKnown RBP7.96□□□□□ -1.14
COL11A1-205ENST00000447608 LRRC4CQ9HCJ2 640 aa7.96□□□□□ -1.14
COL11A1-205ENST00000447608 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms