RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GPM6BQ13491 265 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 ELOA3BQ3SY89 546 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 TATDN1Q6P1N9 297 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 CCDC105Q8IYK2 499 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 ELOA3Q8NG57 546 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.04□□□□□ -1.76
PMS1-215ENST00000447232 ABHD16BQ9H3Z7 469 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 IFT57Q9NWB7 429 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 CLEC1BQ9P126 229 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 ADAMTS5Q9UNA0 930 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 GNEQ9Y223 722 aaKnown RBP4.04□□□□□ -1.76
PMS1-215ENST00000447232 INSL6Q9Y581 213 aa4.04□□□□□ -1.76
PMS1-215ENST00000447232 MICAL3Q7RTP6 2002 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 ARP10275 920 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 GTF2F1P35269 517 aaKnown RBP eCLIP4.03□□□□□ -1.76
PMS1-215ENST00000447232 CHRNA4P43681 627 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 PSMA6P60900 246 aaKnown RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 MECOMQ03112 1051 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 PLS1Q14651 629 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 FSCN1Q16658 493 aaKnown RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 TCTN1Q2MV58 587 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 LRRFIP1Q32MZ4 808 aaKnown RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 RABL6Q3YEC7 729 aaPredicted RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 LCE3BQ5TA77 95 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 CWF19L1Q69YN2 538 aaKnown RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 RIOX2Q8IUF8 465 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 LURAP1LQ8IV03 231 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 UBALD2Q8IYN6 164 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 TSEN2Q8NCE0 465 aaKnown RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 ATG4CQ96DT6 458 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 FGD4Q96M96 766 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 SLC30A3Q99726 388 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 RTKNQ9BST9 563 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 STK31Q9BXU1 1019 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 NEUROD4Q9HD90 331 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 NOP53Q9NZM5 478 aaKnown RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 CACNA1FO60840 1977 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 TRIP12Q14669 1992 aaPredicted RBP4.03□□□□□ -1.76
PMS1-215ENST00000447232 SCN10AQ9Y5Y9 1956 aa4.03□□□□□ -1.76
PMS1-215ENST00000447232 ABHD14A-ACY1A0A1B0GW23 586 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 SIN3BO75182 1162 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 CXCL10P02778 98 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 FURINP09958 794 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 ATF7P17544 494 aaPredicted RBP4.03□□□□□ -1.77
PMS1-215ENST00000447232 PHKA1P46020 1223 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 CNKSR3Q6P9H4 555 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 FBXO11Q86XK2 927 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 SIX5Q8N196 739 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 SUSD6Q92537 303 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 CLUAP1Q96AJ1 413 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 SUCLG2Q96I99 432 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 RPGRIP1Q96KN7 1286 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 PLVAPQ9BX97 442 aa4.03□□□□□ -1.77
PMS1-215ENST00000447232 GNL3LQ9NVN8 582 aaKnown RBP4.03□□□□□ -1.77
PMS1-215ENST00000447232 USP15Q9Y4E8 981 aaPredicted RBP4.03□□□□□ -1.77
PMS1-215ENST00000447232 NBEAQ8NFP9 2946 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 SFI1A8K8P3 1242 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 ADARB2-AS1A8MUL3 147 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 PRR5-ARHGAP8B1AHC4 643 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 K7ELQ4 463 aaPredicted RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 BRD1O95696 1058 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 PROS1P07225 676 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 AOC1P19801 751 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 GUCY1A2P33402 732 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 GNAI1P63096 354 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 ARHGAP8P85298 464 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 SHC2P98077 582 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 FKBP5Q13451 457 aaPredicted RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 LRSAM1Q6UWE0 723 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 TLK2Q86UE8 772 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 TMEM192Q8IY95 271 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 TEX11Q8IYF3 940 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 SUMF1Q8NBK3 374 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 RETREG2Q8NC44 543 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 RHPN1Q8TCX5 695 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 HINFPQ9BQA5 517 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 TANGO6Q9C0B7 1094 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 PHACTR1Q9C0D0 580 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 LMAN2LQ9H0V9 348 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 INCENPQ9NQS7 918 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 TFIP11Q9UBB9 837 aaKnown RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 R4GN57 208 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 SMG1Q96Q15 3661 aaKnown RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 MYO10Q9HD67 2058 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 FLT1P17948 1338 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 A0A1W2PRG0 241 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 C5orf67F2Z3F1 127 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 PI15O43692 258 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 EFCAB14O75071 495 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 ALAS2P22557 587 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 PMLP29590 882 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 MTMR3Q13615 1198 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 RASGRF1Q13972 1273 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 RAB3GAP1Q15042 981 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 SPTY2D1Q68D10 685 aaPredicted RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 ANKRD44Q8N8A2 993 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms