RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CPT1AP50416 773 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 LRRC41Q15345 812 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 ECM1Q16610 540 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 RESP18Q5W5W9 173 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 KRT79Q5XKE5 535 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 POTEBQ6S5H4 581 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 KLHDC9Q8NEP7 349 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 PLIN2Q99541 437 aa20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 TRIP12Q14669 1992 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC4-203ENST00000447216 LOXHD1Q8IVV2 1947 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 SCN10AQ9Y5Y9 1956 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 IGKV6D-21A0A0A0MT36 114 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 GOLGA6L4A6NEF3 574 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 LGR5O75473 907 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 SLITRK3O94933 977 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 SPATA31C1P0DKV0 1188 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 HOXD8P13378 290 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 KARSQ15046 597 aaKnown RBP20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 DGKDQ16760 1214 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 TPH2Q8IWU9 490 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 FSIP1Q8NA03 581 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 PANK2Q9BZ23 570 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 ZNF302Q9NR11 478 aa20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 WRAP73Q9P2S5 460 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC4-203ENST00000447216 A0A087WWV3 80 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 A0A087X0B3 334 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 A0A1B0GVL5 298 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 PPFIA4O75335 1185 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 P4HBP07237 508 aaKnown RBP20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 NKX3-2P78367 333 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 GRB10Q13322 594 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 FAM160B1Q5W0V3 765 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 HAUS3Q68CZ6 603 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 CATSPER3Q86XQ3 398 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 GLG1Q92896 1179 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 PNMA5Q96PV4 448 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 HSD17B14Q9BPX1 270 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 LXNQ9BS40 222 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 POLR3CQ9BUI4 534 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 CCSER1Q9C0I3 900 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 GOLPH3LQ9H4A5 285 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
TRAPPC4-203ENST00000447216 A0A1W2PQ27 194 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 A0A1W2PQ64 194 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 A0A1W2PQD8 194 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 ZNF862O60290 1169 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 CMA1P23946 247 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 MARK3P27448 753 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 RPA1P27694 616 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 QARSP47897 775 aaKnown RBP20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 STAT5BP51692 787 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 KCNA10Q16322 511 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 COL13A1Q5TAT6 717 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 CCSAPQ6IQ19 270 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 PDXDC2PQ6P474 469 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 POTEGQ6S5H5 508 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 RNF180Q86T96 592 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 PDILTQ8N807 584 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 NEK9Q8TD19 979 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 PPP1R13LQ8WUF5 828 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 C16orf70Q9BSU1 422 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 AZI2Q9H6S1 392 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 TUFT1Q9NNX1 390 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 IGSF9BQ9UPX0 1349 aa20.16■□□□□ 0.82
TRAPPC4-203ENST00000447216 EVPLQ92817 2033 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 GOLGA6L22H0YM25 854 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 GJB1P08034 283 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 PFKFB1P16118 471 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 ATP4AP20648 1035 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 CST5P28325 142 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 MCM4P33991 863 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 TXLNAP40222 546 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 CHMP4BP1P59074 171 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 PSMC5P62195 406 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 CXCL17Q6UXB2 119 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 RASSF8Q8NHQ8 419 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 AFAP1L1Q8TED9 768 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 LRRC15Q8TF66 581 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 U2AF1L4Q8WU68 220 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 MRPS27Q92552 414 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 ATP6V0A1Q93050 837 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 CDK5RAP3Q96JB5 506 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 SMARCAD1Q9H4L7 1026 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 DDX19AQ9NUU7 478 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 FAM13BQ9NYF5 915 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 OGDHLQ9ULD0 1010 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 KIAA1024Q9UPX6 916 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 MAFBQ9Y5Q3 323 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 STK24Q9Y6E0 443 aa20.15■□□□□ 0.82
TRAPPC4-203ENST00000447216 KDM3AQ9Y4C1 1321 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 TMEM150BA6NC51 233 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 ZBTB39O15060 712 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 ZEB2O60315 1214 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 SGPL1O95470 568 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 TFRCP02786 760 aaKnown RBP20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 ASGR1P07306 291 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 PLCG1P19174 1290 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms