RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 SPATA31C2B4DYI2 1134 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 M0QZ92 97 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 LGALS2P05162 132 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 TOB1P50616 345 aaPredicted RBP11.51□□□□□ -0.57
LIN54-203ENST00000446851 GRIN1Q05586 938 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 XRRA1Q6P2D8 792 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 LBHD1Q9BQE6 289 aaPredicted RBP11.51□□□□□ -0.57
LIN54-203ENST00000446851 BHMT2Q9H2M3 363 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 ERAP1Q9NZ08 941 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.57
LIN54-203ENST00000446851 THPOP40225 353 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 ITGA7Q13683 1181 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 CEP57L1Q8IYX8 460 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 SLC7A3Q8WY07 619 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 CCDC34Q96HJ3 373 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 FAM20AQ96MK3 541 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 TCHPQ9BT92 498 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 TRPV6Q9H1D0 765 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
LIN54-203ENST00000446851 EML1O00423 815 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 BMP15O95972 392 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 PRKCEQ02156 737 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 CCDC60Q8IWA6 550 aaPredicted RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 ERCC4Q92889 916 aaPredicted RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 EIF2AK1Q9BQI3 630 aaKnown RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 TRMT13Q9NUP7 481 aaKnown RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 HDAC6Q9UBN7 1215 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 POLR2DO15514 142 aaKnown RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 MAFGO15525 162 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 STAM2O75886 525 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 QARSP47897 775 aaKnown RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 TRAPPC10P48553 1259 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 USP49Q70CQ1 688 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 POLR3EQ9NVU0 708 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 E9PMD0 336 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 BRD1O95696 1058 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 DNM2P50570 870 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 TLE2Q04725 743 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 MFSD10Q14728 455 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 MAMDC4Q6UXC1 1216 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 OTUD6AQ7L8S5 288 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 CFHR5Q9BXR6 569 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 ELP1O95163 1332 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 KINO60870 393 aaKnown RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 CCNE2O96020 404 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 MMP3P08254 477 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 INSRRP14616 1297 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
LIN54-203ENST00000446851 NLRP7Q8WX94 980 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 RNPEPQ9H4A4 650 aa11.5□□□□□ -0.57
LIN54-203ENST00000446851 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 CLCN3P51790 818 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 MSL3Q8N5Y2 521 aaKnown RBP11.49□□□□□ -0.57
LIN54-203ENST00000446851 SAMD3Q8N6K7 520 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 USP6NLQ92738 828 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 TMOD1P28289 359 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
LIN54-203ENST00000446851 JAK3P52333 1124 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 RHPN2Q8IUC4 686 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 C11orf49Q9H6J7 331 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 ZSWIM4Q9H7M6 989 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 NKRFO15226 690 aaKnown RBP eCLIP11.49□□□□□ -0.571e-13■□□□□ 11
LIN54-203ENST00000446851 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
LIN54-203ENST00000446851 KCNA2P16389 499 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 PSEN2P49810 448 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 ARHGAP1Q07960 439 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 PTGISQ16647 500 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 CNNM3Q8NE01 707 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 LEO1Q8WVC0 666 aaPredicted RBP11.49□□□□□ -0.57
LIN54-203ENST00000446851 BICD1Q96G01 975 aa11.49□□□□□ -0.57
LIN54-203ENST00000446851 BIN1O00499 593 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 TLR3O15455 904 aaKnown RBP11.48□□□□□ -0.57
LIN54-203ENST00000446851 UPP2O95045 317 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 INO80B-WBP1J3KQ70 363 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 P4HBP07237 508 aaKnown RBP11.48□□□□□ -0.57
LIN54-203ENST00000446851 SUPT20HL2P0C7V6 817 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 SYKP43405 635 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 ASIC1P78348 528 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 HAS1Q92839 578 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 IL17RAQ96F46 866 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 RIT2Q99578 217 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 GPR20Q99678 358 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 KATNAL1Q9BW62 490 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 INO80BQ9C086 356 aaPredicted RBP11.48□□□□□ -0.57
LIN54-203ENST00000446851 BLZF1Q9H2G9 400 aa11.48□□□□□ -0.57
LIN54-203ENST00000446851 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms