RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TAP1Q03518 808 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 IFRD2Q12894 506 aaPredicted RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 ZBTB33Q86T24 672 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 RHOT2Q8IXI1 618 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 GJA10Q969M2 543 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 MAGEB2O15479 319 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 EVI5O60447 810 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 INHBAP08476 426 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 HDLBPQ00341 1268 aaKnown RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 RAD51Q06609 339 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 PCGF5Q86SE9 256 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 KCNK3O14649 394 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 CALB1P05937 261 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 SCYL1Q96KG9 808 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 PIGSQ96S52 555 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 SLC39A2Q9NP94 309 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 SRP68Q9UHB9 627 aaKnown RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 NEXMIFQ5QGS0 1516 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 C1orf167Q5SNV9 1468 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 CPDO75976 1380 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 EPHB1P54762 984 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 SCRN1Q12765 414 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 THOC5Q13769 683 aaKnown RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 RASGRF1Q13972 1273 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 KRT33BQ14525 404 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 TSNAXIP1Q2TAA8 658 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 RILPQ96NA2 401 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 SEPT10Q9P0V9 454 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 ACTN1P12814 892 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 RFX6Q8HWS3 928 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 SKA2Q8WVK7 121 aaPredicted RBP9.23□□□□□ -0.93
PTPN3-204ENST00000446349 ZNF302Q9NR11 478 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 PRR36Q9H6K5 1346 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 hCG_1642624A0A1W2PR95 340 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 MOCS3O95396 460 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 CETPP11597 493 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 FAN1Q9Y2M0 1017 aa9.23□□□□□ -0.93
PTPN3-204ENST00000446349 ABCB4P21439 1286 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 IFNA8P32881 189 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 TWF2Q6IBS0 349 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 SNRNP48Q6IEG0 339 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 LCORLQ8N3X6 602 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PUS3Q9BZE2 481 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 VPS33BQ9H267 617 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PIDD1Q9HB75 910 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 RGL2O15211 777 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 DYNLL1P63167 89 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 TRMT2AQ8IZ69 625 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 NLRP4Q96MN2 994 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PPP2R3BQ9Y5P8 575 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 MADDQ8WXG6 1647 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 GOLGA8KD6RF30 607 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 SERPING1P05155 500 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PTH1RQ03431 593 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 RAB42Q8N4Z0 105 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 ISCA1Q9BUE6 129 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 CNTNAP4Q9C0A0 1308 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 REREQ9P2R6 1566 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 LAMB3Q13751 1172 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 LMNTD2Q8IXW0 634 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 RSRC1Q96IZ7 334 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 Q9H521 79 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 SERPINA10Q9UK55 444 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 STAP1Q9ULZ2 295 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 EPN1Q9Y6I3 576 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 PXDNLA1KZ92 1463 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 TNPO2O14787 897 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 STX2P32856 288 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 COG2Q14746 738 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 ARHGEF18Q6ZSZ5 1173 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 STRBPQ96SI9 672 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 OSBPL5Q9H0X9 879 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 UBN2Q6ZU65 1347 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 ASAP2O43150 1006 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 ORC4O43929 436 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 CPP00450 1065 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 MXD4Q14582 209 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 STILQ15468 1287 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 KRT71Q3SY84 523 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 C4orf50Q6ZRC1 276 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 TUBB6Q9BUF5 446 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 CARD6Q9BX69 1037 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 OGFRQ9NZT2 677 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 MTMR6Q9Y217 621 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 P4HBP07237 508 aaKnown RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 TBC1D10BQ4KMP7 808 aaPredicted RBP9.22□□□□□ -0.93
PTPN3-204ENST00000446349 UBN1Q9NPG3 1134 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 KCND2Q9NZV8 630 aa9.22□□□□□ -0.93
PTPN3-204ENST00000446349 GCNT4Q9P109 453 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms