RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GHRP10912 638 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 AKAP17AQ02040 695 aaKnown RBP13.43□□□□□ -0.26
TTC28-203ENST00000442232 ADCK5Q3MIX3 580 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 CEP55Q53EZ4 464 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 MCTP2Q6DN12 878 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 BLOC1S2Q6QNY1 142 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 RPAINQ86UA6 219 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 TOP1MTQ969P6 601 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 JAKMIP1Q96N16 626 aaKnown RBP13.43□□□□□ -0.26
TTC28-203ENST00000442232 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 KCNH7Q9NS40 1196 aa13.43□□□□□ -0.26
TTC28-203ENST00000442232 SCG2P13521 617 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 SREBF1P36956 1147 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 ACTR2P61160 394 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 MRPS6P82932 125 aaKnown RBP13.42□□□□□ -0.26
TTC28-203ENST00000442232 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
TTC28-203ENST00000442232 TIGD5Q53EQ6 642 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 IER5Q5VY09 327 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 FAM160B1Q5W0V3 765 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 TSHZ1Q6ZSZ6 1077 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
TTC28-203ENST00000442232 FAM49AQ9H0Q0 323 aaPredicted RBP13.42□□□□□ -0.26
TTC28-203ENST00000442232 RWDD3Q9Y3V2 267 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 LOXHD1Q8IVV2 1947 aa13.42□□□□□ -0.26
TTC28-203ENST00000442232 MYH9P35579 1960 aaKnown RBP13.41□□□□□ -0.26
TTC28-203ENST00000442232 MBLAC1A4D2B0 266 aaPredicted RBP13.41□□□□□ -0.26
TTC28-203ENST00000442232 BACH1O14867 736 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 REC8O95072 547 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 CHRNA1P02708 482 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 INSRRP14616 1297 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 PSMA5P28066 241 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 SLC26A2P50443 739 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 STAT5BP51692 787 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 KCNQ1P51787 676 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 APOBRQ0VD83 1088 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 FUT2Q10981 343 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 TYW1BQ6NUM6 668 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 Q6ZUG5 572 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 FIBCD1Q8N539 461 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 DNAJB3Q8WWF6 145 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 BRF1Q92994 677 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 IL17RAQ96F46 866 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 AGO4Q9HCK5 861 aaKnown RBP13.41□□□□□ -0.26
TTC28-203ENST00000442232 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
TTC28-203ENST00000442232 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 DDX39AO00148 427 aaKnown RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 ARP10275 920 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 BMP1P13497 986 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 GNA11P29992 359 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 CDC27P30260 824 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 CTNNB1P35222 781 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 SETQ01105 290 aaPredicted RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 MGAT3Q09327 533 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 GPM6BQ13491 265 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 LPIN1Q14693 890 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 PLCB4Q15147 1175 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 NIPA1Q7RTP0 329 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 PLPPR4Q7Z2D5 763 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 PLA2G4DQ86XP0 818 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 REXO1Q8N1G1 1221 aaKnown RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 UBE2ZQ9H832 354 aaPredicted RBP13.4□□□□□ -0.26
TTC28-203ENST00000442232 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 TRPV2Q9Y5S1 764 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 REV3LO60673 3130 aa13.4□□□□□ -0.26
TTC28-203ENST00000442232 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 BRWD1Q9NSI6 2320 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 MEIS1O00470 390 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
TTC28-203ENST00000442232 CLK2P49760 499 aaKnown RBP13.39□□□□□ -0.27
TTC28-203ENST00000442232 ITGB3BPQ13352 177 aaPredicted RBP13.39□□□□□ -0.27
TTC28-203ENST00000442232 MARCH8Q5T0T0 291 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 MIS18BP1Q6P0N0 1132 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 CYP2W1Q8TAV3 490 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 PCYT2Q99447 389 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 PCDHA2Q9Y5H9 948 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
TTC28-203ENST00000442232 COL1A2P08123 1366 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 NID2Q14112 1375 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 SMIM35A0A1B0GVV1 85 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 H3BNC9 293 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 PRPF3O43395 683 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms