RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZNF76P36508 570 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 ANAPC15P60006 121 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 DEFB103AP81534 67 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 PPFIA1Q13136 1202 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 ADGRE1Q14246 886 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 GRIK4Q16099 956 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 PPP2R2DQ66LE6 453 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 PLA2G4DQ86XP0 818 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 ARHGEF15O94989 841 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 KCNJ6P48051 423 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 SSRP1Q08945 709 aaKnown RBP21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 IKBKEQ14164 716 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 RUFY4Q6ZNE9 571 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 PLPPR4Q7Z2D5 763 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 DBF4BQ8NFT6 615 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 BICD2Q8TD16 824 aa21.53■■□□□ 1.04
HMGB3P22-201ENST00000442010 EFCAB14O75071 495 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 DEXIO95424 95 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 CTSHP09668 335 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 STK3Q13188 491 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 PLCB4Q15147 1175 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 TAF2Q6P1X5 1199 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 ABHD15Q6UXT9 468 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 TMCO2Q7Z6W1 182 aaPredicted RBP21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 TRIM22Q8IYM9 498 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 LENG9Q96B70 501 aa21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 PRRC2BQ5JSZ5 2229 aaKnown RBP21.52■■□□□ 1.04
HMGB3P22-201ENST00000442010 M0R2N6 131 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 IPO5O00410 1097 aaKnown RBP21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 CPLX1O14810 134 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 CHRNA1P02708 482 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 INSRRP14616 1297 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 STAT5BP51692 787 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 SETQ01105 290 aaPredicted RBP21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 MGAT3Q09327 533 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 SCRN1Q12765 414 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 NPY5RQ15761 445 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 USP38Q8NB14 1042 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 GAS2L1Q99501 681 aaPredicted RBP21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 AZI2Q9H6S1 392 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 TUBE1Q9UJT0 475 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 TPCN1Q9ULQ1 816 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 TRANK1O15050 2925 aa21.51■■□□□ 1.03
HMGB3P22-201ENST00000442010 RRN3P2A6NIE6 340 aa21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 KIF28PB7ZC32 967 aa21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 DDX39AO00148 427 aaKnown RBP21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 GJB5O95377 273 aa21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 TAP1Q03518 808 aa21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
HMGB3P22-201ENST00000442010 TLL1O43897 1013 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 PFKFB2O60825 505 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 SLC26A2P50443 739 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 NLRP5P59047 1200 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 CCDC60Q8IWA6 550 aaPredicted RBP21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 FAM177A1Q8N128 213 aaPredicted RBP21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 DAGLBQ8NCG7 672 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 ZBTB10Q96DT7 871 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 UIMC1Q96RL1 719 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 ZNF577Q9BSK1 485 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 PCDHA4Q9UN74 947 aa21.49■■□□□ 1.03
HMGB3P22-201ENST00000442010 TTC3P53804 2025 aa21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 COL4A4P53420 1690 aaPredicted RBP21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 LCHNA4D1U4 455 aa21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 USP11P51784 963 aa21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 PRR16Q569H4 304 aa21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 DNAJB3Q8WWF6 145 aa21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 SEPT8Q92599 483 aa21.48■■□□□ 1.03
HMGB3P22-201ENST00000442010 POTEB3A0JP26 581 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 EPOPA6NHQ4 379 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 SEC24BO95487 1268 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 ATP4AP20648 1035 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 AK2P54819 239 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 IGBP1P78318 339 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 ZNF746Q6NUN9 644 aaPredicted RBP21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 CPLX2Q6PUV4 134 aaKnown RBP21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 POTEBQ6S5H4 581 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 SPRED2Q7Z698 418 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 TRAPPC12Q8WVT3 735 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 TNPO1Q92973 898 aaKnown RBP21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 RAD9AQ99638 391 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 SLKQ9H2G2 1235 aaPredicted RBP21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 TRPC6Q9Y210 931 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 PCDHA2Q9Y5H9 948 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 VCANP13611 3396 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 CUL9Q8IWT3 2517 aa21.47■■□□□ 1.03
HMGB3P22-201ENST00000442010 NLRC5Q86WI3 1866 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 CTDNEP1O95476 244 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 POU3F3P20264 500 aaPredicted RBP21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 GALNT17Q6IS24 598 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 RSPH3Q86UC2 560 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 BLIDQ8IZY5 108 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 TBCKQ8TEA7 893 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 APBB2Q92870 758 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 CERS4Q9HA82 394 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 ZNF302Q9NR11 478 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 STK36Q9NRP7 1315 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms