RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
ITGB1-207ENST00000439974 MKRN4PQ13434 485 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-207ENST00000439974 MTMR1Q13613 665 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 AAK1Q2M2I8 961 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 KRT40Q6A162 431 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 FAM117BQ6P1L5 589 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 ADAMTS19Q8TE59 1207 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 SEPT8Q92599 483 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 TGS1Q96RS0 853 aaKnown RBP18.33■□□□□ 0.52
ITGB1-207ENST00000439974 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 BARHL2Q9NY43 387 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 UBIAD1Q9Y5Z9 338 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 XIRP2A4UGR9 3374 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 LINC01553A4QN01 128 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 SMCO2A6NFE2 343 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 RBAK-RBAKDNI3L0D1 243 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 MAFGO15525 162 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 LPXNO60711 386 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 ADCY7P51828 1080 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 ERVK-21P61565 698 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 SSRP1Q08945 709 aaKnown RBP18.32■□□□□ 0.52
ITGB1-207ENST00000439974 ANKRD1Q15327 319 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 MYOCDQ8IZQ8 938 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 SEPT1Q8WYJ6 367 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 VPS54Q9P1Q0 977 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 INSL6Q9Y581 213 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 SIP14410 1827 aa18.32■□□□□ 0.52
ITGB1-207ENST00000439974 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 FAM26DQ5JW98 314 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 PPP1R18Q6NYC8 613 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 GDPD5Q8WTR4 605 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 UHRF1Q96T88 793 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-207ENST00000439974 RNF26Q9BY78 433 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-207ENST00000439974 UPF2Q9HAU5 1272 aaKnown RBP18.31■□□□□ 0.52
ITGB1-207ENST00000439974 ERAP1Q9NZ08 941 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 LMCD1Q9NZU5 365 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 MTUS1Q9ULD2 1270 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 COG5Q9UP83 839 aa18.31■□□□□ 0.52
ITGB1-207ENST00000439974 TCF20Q9UGU0 1960 aaKnown RBP18.3■□□□□ 0.52
ITGB1-207ENST00000439974 GSTTP1A0A1W2PQM5 241 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
ITGB1-207ENST00000439974 TFF2Q03403 129 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 JAKMIP3Q5VZ66 844 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 TAF2Q6P1X5 1199 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 APBB2Q92870 758 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 BACH2Q9BYV9 841 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 SUGCTQ9HAC7 445 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 RIC8AQ9NPQ8 531 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 PKD2L1Q9P0L9 805 aa18.3■□□□□ 0.52
ITGB1-207ENST00000439974 hCG_1984214I3L0E3 225 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 MARK3P27448 753 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 FOSBP53539 338 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 TRIM22Q8IYM9 498 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 ZNF713Q8N859 430 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-207ENST00000439974 SP7Q8TDD2 431 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-207ENST00000439974 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 GLG1Q92896 1179 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 GTF3C6Q969F1 213 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 OSBPL7Q9BZF2 842 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 SMARCAD1Q9H4L7 1026 aa18.29■□□□□ 0.52
ITGB1-207ENST00000439974 JPH1Q9HDC5 661 aaPredicted RBP18.29■□□□□ 0.52
ITGB1-207ENST00000439974 JAK2O60674 1132 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 FOSP01100 380 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-207ENST00000439974 BMP1P13497 986 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 GRIK4Q16099 956 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
ITGB1-207ENST00000439974 RSPH3Q86UC2 560 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 TOP1MTQ969P6 601 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 MXRA8Q9BRK3 442 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 IFIH1Q9BYX4 1025 aaKnown RBP18.28■□□□□ 0.52
ITGB1-207ENST00000439974 GJB4Q9NTQ9 266 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
ITGB1-207ENST00000439974 KCNQ1P51787 676 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 RUFY4Q6ZNE9 571 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 HLA-CQ95604 372 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 YME1L1Q96TA2 773 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 SDF4Q9BRK5 362 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 ANO3Q9BYT9 981 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 GLT8D2Q9H1C3 349 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 KCNH7Q9NS40 1196 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 SLC9A2Q9UBY0 812 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 TUBE1Q9UJT0 475 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 LIMCH1Q9UPQ0 1083 aa18.27■□□□□ 0.52
ITGB1-207ENST00000439974 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.26■□□□□ 0.51
ITGB1-207ENST00000439974 MBLAC1A4D2B0 266 aaPredicted RBP18.26■□□□□ 0.51
ITGB1-207ENST00000439974 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
ITGB1-207ENST00000439974 DEXIO95424 95 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 CHRNA1P02708 482 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 MGAT3Q09327 533 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 AP3B2Q13367 1082 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 RABEP1Q15276 862 aa18.26■□□□□ 0.51
ITGB1-207ENST00000439974 FBXO22Q8NEZ5 403 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms