RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 SMARCC2Q8TAQ2 1214 aa7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 MMP19Q99542 508 aa7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 AP5M1Q9H0R1 490 aa7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 NKX2-4Q9H2Z4 354 aa7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 POLR3AO14802 1390 aaPredicted RBP7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 RGPD8O14715 1765 aaPredicted RBP7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 STRCQ7RTU9 1775 aa7.54□□□□□ -1.2
NANOGP9-201ENST00000439890 A0A1B0GTL3 188 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 FOXD2O60548 495 aaPredicted RBP7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 HSPA2P54652 639 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 FXNQ16595 210 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 B3GNT8Q7Z7M8 397 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 FNIP1Q8TF40 1166 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 MRGPRX3Q96LB0 322 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 ADAM7Q9H2U9 754 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 USP40Q9NVE5 1235 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 PRKAG3Q9UGI9 489 aa7.53□□□□□ -1.2
NANOGP9-201ENST00000439890 C22orf46C9J442 243 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 TBX1O43435 398 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 MYO1BO43795 1136 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 SUSD5O60279 629 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 ITGAVP06756 1048 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 SLURP1P55000 103 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 RPL11P62913 178 aaKnown RBP7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 ZNF227Q86WZ6 799 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 TP53I13Q8NBR0 393 aaPredicted RBP7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 CFAP53Q96M91 514 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 USP6P35125 1406 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 ACEP12821 1306 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 TTC21AQ8NDW8 1320 aa7.52□□□□□ -1.21
NANOGP9-201ENST00000439890 NRKQ7Z2Y5 1582 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 MEFVO15553 781 aaPredicted RBP7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 DNAJA1P31689 397 aaKnown RBP7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 ETFBP38117 255 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 ARID5AQ03989 594 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 WDR43Q15061 677 aaKnown RBP eCLIP7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 INF2Q27J81 1249 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 IQCEQ6IPM2 695 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 LIPIQ6XZB0 460 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 FRS2Q8WU20 508 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 DIO2Q92813 273 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 DDX11Q96FC9 970 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 SPATA25Q9BR10 227 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 DCCP43146 1447 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 TTC21BQ7Z4L5 1316 aa7.51□□□□□ -1.21
NANOGP9-201ENST00000439890 CYP2C8P10632 490 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 FPR2P25090 351 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 CACNB2Q08289 660 aaPredicted RBP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 KCNAB2Q13303 367 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 VWA3BQ502W6 1294 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 NGDNQ8NEJ9 315 aaKnown RBP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 ZNF526Q8TF50 670 aaPredicted RBP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 DPF3Q92784 378 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 ZNF428Q96B54 188 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 ZBTB8AQ96BR9 441 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 COG3Q96JB2 828 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 CHAMP1Q96JM3 812 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 YIPF4Q9BSR8 244 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 STRCP1A6NGW2 1772 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 BLMP54132 1417 aaPredicted RBP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 SSH2Q76I76 1423 aa7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 MAP2P11137 1827 aaKnown RBP7.5□□□□□ -1.21
NANOGP9-201ENST00000439890 AATKQ6ZMQ8 1374 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 AGRPO00253 132 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 HOXC12P31275 282 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 MTHFSP49914 203 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 CAP1Q01518 475 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 PRSS53Q2L4Q9 553 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 NT5DC1Q5TFE4 455 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 E4F1Q66K89 784 aaPredicted RBP7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 ETV3LQ6ZN32 361 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 SAPCD2Q86UD0 394 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 PPIL6Q8IXY8 311 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 NPLOC4Q8TAT6 608 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 PLEKHO2Q8TD55 490 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 TRMT2BQ96GJ1 504 aaKnown RBP7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 ZNF408Q9H9D4 720 aa7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 COA3Q9Y2R0 106 aaPredicted RBP7.49□□□□□ -1.21
NANOGP9-201ENST00000439890 TMEM94Q12767 1356 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 KIF1AQ12756 1690 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 USP54Q70EL1 1684 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 SMARCA5O60264 1052 aaPredicted RBP7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 RBM25P49756 843 aaKnown RBP7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 HTRA3P83110 453 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 SMAD4Q13485 552 aaKnown RBP7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 CEP68Q76N32 757 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 NME9Q86XW9 330 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 NGEFQ8N5V2 710 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 CXorf38Q8TB03 319 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 PMFBP1Q8TBY8 1022 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 CPA5Q8WXQ8 436 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 SEC14L1Q92503 715 aa7.48□□□□□ -1.21
NANOGP9-201ENST00000439890 TMEM169Q96HH4 297 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms