RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HOXC10Q9NYD6 342 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMOD4Q9NZQ9 345 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCDC39Q9UFE4 941 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 USTQ9Y2C2 406 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 RABGAP1Q9Y3P9 1069 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 CSADQ9Y600 493 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZHX2Q9Y6X8 837 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 PHIPQ8WWQ0 1821 aa4.48□□□□□ -1.69
HMGB1P37-201ENST00000439613 MYPNQ86TC9 1320 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 WDR90Q96KV7 1748 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 PARP14Q460N5 1801 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SMCHD1A6NHR9 2005 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 GCOM1H8Y6P7 765 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CXCL11O14625 94 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 MEIS2O14770 477 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TBX3O15119 743 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 POLR2DO15514 142 aaKnown RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 MARCH6O60337 910 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 FLOT1O75955 427 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CYP3A4P08684 503 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLFN14P0C7P3 912 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 POLR2MP0CAP2 368 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 VCAM1P19320 739 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 HOXA7P31268 230 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SREBF1P36956 1147 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 ARHGAP4P98171 946 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 FOXK2Q01167 660 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 PTSQ03393 145 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 PPATQ06203 517 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 COG2Q14746 738 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 ZYXQ15942 572 aaKnown RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CALCRLQ16602 461 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 OCLNQ16625 522 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SWI5Q1ZZU3 235 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TKFCQ3LXA3 575 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 USH1GQ495M9 461 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 LONRF3Q496Y0 759 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 Q4G0T1 1027 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 C4orf17Q53FE4 359 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 NOM1Q5C9Z4 860 aaKnown RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CT47A1Q5JQC4 288 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 KIAA1755Q5JYT7 1200 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCDC174Q6PII3 467 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 USP17L6PQ6QN14 398 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 ARMC9Q7Z3E5 817 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 LDHDQ86WU2 507 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLFN12Q8IYM2 578 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 ANKRD13AQ8IZ07 590 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 KCTD17Q8N5Z5 321 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TRIML1Q8N9V2 468 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 RASSF8Q8NHQ8 419 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CLP1Q92989 425 aaKnown RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CALML4Q96GE6 196 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 FAM20AQ96MK3 541 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 MBOAT7Q96N66 472 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 MTMR9Q96QG7 549 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 FUCA2Q9BTY2 467 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 ANO3Q9BYT9 981 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 GLIS2Q9BZE0 524 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCSER1Q9C0I3 900 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 LRRC27Q9C0I9 530 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 RBSNQ9H1K0 784 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CUEDC2Q9H467 287 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TAF1DQ9H5J8 278 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 RPAP3Q9H6T3 665 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 MAGEF1Q9HAY2 307 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SLC38A10Q9HBR0 1119 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TIMMDC1Q9NPL8 285 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TMEM260Q9NX78 707 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 TUBE1Q9UJT0 475 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 CCPG1Q9ULG6 757 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 PPP1R9AQ9ULJ8 1098 aa4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SCAF8Q9UPN6 1271 aaKnown RBP4.47□□□□□ -1.69
HMGB1P37-201ENST00000439613 SRCAPQ6ZRS2 3230 aa4.46□□□□□ -1.69
HMGB1P37-201ENST00000439613 RBBP6Q7Z6E9 1792 aaKnown RBP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 SLC35F4A4IF30 521 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 BECN2A8MW95 431 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ADM5C9JUS6 153 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 GOLGA6L19H0YKK7 550 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 VWA5AO00534 786 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ADAMTS3O15072 1205 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CIITAP33076 1130 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZNF76P36508 570 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 STAT6P42226 847 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 TXKP42681 527 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 ZNF165P49910 485 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 HSD17B4P51659 736 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 HMGCS2P54868 508 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 NLRP12P59046 1061 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 SNAP25P60880 206 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 TPM4P67936 248 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 FKBP1BP68106 108 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 AMPD3Q01432 767 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 GHRHRQ02643 423 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 CCDC173Q0VFZ6 552 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PABPC4Q13310 644 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 PPIL2Q13356 520 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 VGLL4Q14135 290 aa4.46□□□□□ -1.7
HMGB1P37-201ENST00000439613 POSTNQ15063 836 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms