RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 SP4Q02446 784 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 PTH1RQ03431 593 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 TROAPQ12815 778 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 GPM6BQ13491 265 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 PTPROQ16827 1216 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 LEXMQ3ZCV2 418 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 METTL7BQ6UX53 244 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 FAM178BQ8IXR5 827 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.34□□□□□ -0.59
CCDC66-207ENST00000439445 TOP1MTQ969P6 601 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 INPP4AQ96PE3 977 aaPredicted RBP11.34□□□□□ -0.59
CCDC66-207ENST00000439445 GPR20Q99678 358 aa11.34□□□□□ -0.59
CCDC66-207ENST00000439445 ZNF215Q9UL58 517 aaPredicted RBP11.34□□□□□ -0.59
CCDC66-207ENST00000439445 FAM86C2PA6NEL3 165 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 E7EWF7 191 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 H3BNC9 293 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 MAP3K7O43318 606 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 CAND2O75155 1236 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 SSTR3P32745 418 aaPredicted RBP11.33□□□□□ -0.6
CCDC66-207ENST00000439445 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 TTC22Q5TAA0 569 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 PTCRAQ6ISU1 281 aaPredicted RBP11.33□□□□□ -0.6
CCDC66-207ENST00000439445 USP17L6PQ6QN14 398 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 TRIM50Q86XT4 487 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 TMEM192Q8IY95 271 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 GJD3Q8N144 294 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 SMARCC2Q8TAQ2 1214 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 CUL5Q93034 780 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 YTHDC1Q96MU7 727 aaKnown RBP11.33□□□□□ -0.6
CCDC66-207ENST00000439445 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
CCDC66-207ENST00000439445 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 WDFY4Q6ZS81 3184 aa11.33□□□□□ -0.6
CCDC66-207ENST00000439445 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.32□□□□□ -0.6
CCDC66-207ENST00000439445 GRXCR2A6NFK2 248 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
CCDC66-207ENST00000439445 GSPT1P15170 499 aaKnown RBP11.32□□□□□ -0.6
CCDC66-207ENST00000439445 IL9P15248 144 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 CHMLP26374 656 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 TIGD5Q53EQ6 642 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 PCNX4Q63HM2 1172 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 LMBR1Q8WVP7 490 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 APBB2Q92870 758 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
CCDC66-207ENST00000439445 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 FRMPD4Q14CM0 1322 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
CCDC66-207ENST00000439445 CHRNA1P02708 482 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 KIF5BP33176 963 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 TCF7P36402 384 aaPredicted RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 ADAM17P78536 824 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 XRRA1Q6P2D8 792 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 NLRX1Q86UT6 975 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 FIBCD1Q8N539 461 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 GIMAP8Q8ND71 665 aaPredicted RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 CTCFLQ8NI51 663 aaPredicted RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
CCDC66-207ENST00000439445 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
CCDC66-207ENST00000439445 NLRC5Q86WI3 1866 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 MEIS2O14770 477 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 GHRP10912 638 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 CTNNB1P35222 781 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 ANTXR2P58335 489 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 RSPH3Q86UC2 560 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 ZNF654Q8IZM8 581 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 NEK9Q8TD19 979 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 NSUN3Q9H649 340 aaKnown RBP11.3□□□□□ -0.6
CCDC66-207ENST00000439445 FAM50BQ9Y247 325 aa11.3□□□□□ -0.6
CCDC66-207ENST00000439445 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 SGSM2O43147 1006 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 ATP9AO75110 1047 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 DDAH1O94760 285 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 ALADP13716 330 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 MARK3P27448 753 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 BMPR1AP36894 532 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 GNAQP50148 359 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 PPFIA1Q13136 1202 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 LPIN1Q14693 890 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 TAF2Q6P1X5 1199 aa11.29□□□□□ -0.6
CCDC66-207ENST00000439445 CASC1Q6TDU7 716 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms