RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RAD51CO43502 376 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 CTNND1O60716 968 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 VPS41P49754 854 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 SNCBQ16143 134 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 SLFN13Q68D06 897 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 DAAM2Q86T65 1068 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 C4orf32Q8N8J7 132 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 PIGOQ8TEQ8 1089 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 CASKIN2Q8WXE0 1202 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 NOX5Q96PH1 765 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 YIPF3Q9GZM5 350 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 SEMA6BQ9H3T3 888 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 DAPK3O43293 454 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 TTLL1O95922 423 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 GYS1P13807 737 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 SP4Q02446 784 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 NEDD9Q14511 834 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 CERKLQ49MI3 558 aaPredicted RBP10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 MYOCDQ8IZQ8 938 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 TEKT1Q969V4 418 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 ELAC2Q9BQ52 826 aaKnown RBP10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 ACTN1P12814 892 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 EEF1GP26641 437 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 FLT3P36888 993 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 PBX1P40424 430 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 LRCH2Q5VUJ6 765 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 ARMC3Q5W041 872 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 TTI2Q6NXR4 508 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 BARGINQ6ZT62 677 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 TPH2Q8IWU9 490 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 KIAA0895Q8NCT3 520 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 GIMAP8Q8ND71 665 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 TRIM51Q9BSJ1 452 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 LRRC4CQ9HCJ2 640 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 TJP1Q07157 1748 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 MMP10P09238 476 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 EEF2P13639 858 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 PAK2Q13177 524 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 TRIM14Q14142 442 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 CPXCR1Q8N123 301 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 CYFIP2Q96F07 1278 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 STAMBPL1Q96FJ0 436 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 DHTKD1Q96HY7 919 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZMYND12Q9H0C1 365 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 KLRC4O43908 158 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 KLRC1P26715 233 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 SESN3P58005 492 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 GRB10Q13322 594 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 ADAM9Q13443 819 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 CAPN12Q6ZSI9 719 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 CACNA2D3Q8IZS8 1091 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 PRCCQ92733 491 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 JMJD4Q9H9V9 463 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 FBXL5Q9UKA1 691 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 USP54Q70EL1 1684 aa10.86□□□□□ -0.67
CDC42SE1-202ENST00000439374 RHOBTB3O94955 611 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 ITGA4P13612 1032 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 PTGISQ16647 500 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 IKZF4Q9H2S9 585 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 BCAS3Q9H6U6 928 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 KCNK9Q9NPC2 374 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 KBTBD4Q9NVX7 518 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 GPR75-ASB3A0A0A6YYF3 556 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 H0Y3Z8 333 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 GCNT3O95395 438 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 APBA3O96018 575 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CHRNA5P30532 468 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZBED6P86452 979 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 SLC17A8Q8NDX2 589 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CYP2W1Q8TAV3 490 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 FGFBP2Q9BYJ0 223 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CCSER1Q9C0I3 900 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 THAP9Q9H5L6 903 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 RGL1Q9NZL6 768 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CAPN11Q9UMQ6 739 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 PARP4Q9UKK3 1724 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CNTNAP4Q9C0A0 1308 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CHUKO15111 745 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 BBOX1O75936 387 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 MAP2K1Q02750 393 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 ICA1Q05084 483 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 DDR1Q08345 913 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 KLHL30Q0D2K2 578 aa10.85□□□□□ -0.67
CDC42SE1-202ENST00000439374 CTTNQ14247 550 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms