RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 OR6J1Q8NGC5 347 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 PLIN2Q99541 437 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 LXNQ9BS40 222 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 NUP62CLQ9H1M0 184 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 CLSTN2Q9H4D0 955 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 ZSWIM4Q9H7M6 989 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 RGL1Q9NZL6 768 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 SERTAD1Q9UHV2 236 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 KIAA1024Q9UPX6 916 aa23.18■■□□□ 1.3
CHD3-204ENST00000439235 POTEFA5A3E0 1075 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 ACTN4O43707 911 aaKnown RBP23.17■■□□□ 1.3
CHD3-204ENST00000439235 SLITRK3O94933 977 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 SLFN14P0C7P3 912 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 PRKAR2AP13861 404 aaKnown RBP23.17■■□□□ 1.3
CHD3-204ENST00000439235 PSMC5P62195 406 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 CACNB2Q08289 660 aaPredicted RBP23.17■■□□□ 1.3
CHD3-204ENST00000439235 CTTNQ14247 550 aaKnown RBP23.17■■□□□ 1.3
CHD3-204ENST00000439235 LONRF3Q496Y0 759 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 CCDC183Q5T5S1 534 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 POTEGQ6S5H5 508 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 TPH2Q8IWU9 490 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 BANK1Q8NDB2 785 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 TRPV1Q8NER1 839 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 PPTC7Q8NI37 304 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 GPR20Q99678 358 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 HOOK1Q9UJC3 728 aaKnown RBP23.17■■□□□ 1.3
CHD3-204ENST00000439235 GNEQ9Y223 722 aaKnown RBP23.17■■□□□ 1.3
CHD3-204ENST00000439235 Q9Y3F1 56 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 PTCH2Q9Y6C5 1203 aa23.17■■□□□ 1.3
CHD3-204ENST00000439235 BACH1O14867 736 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 CTAGE5O15320 804 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 SEPT4O43236 478 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 LYPLA2O95372 231 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 GRK4P32298 578 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 CTCFP49711 727 aaPredicted RBP23.16■■□□□ 1.3
CHD3-204ENST00000439235 HSDL1Q3SXM5 330 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 TMEM63BQ5T3F8 832 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 GJC2Q5T442 439 aaPredicted RBP23.16■■□□□ 1.3
CHD3-204ENST00000439235 FAM160B1Q5W0V3 765 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 TLK2Q86UE8 772 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 ELOA2Q8IYF1 753 aaPredicted RBP23.16■■□□□ 1.3
CHD3-204ENST00000439235 GABBR1Q9UBS5 961 aa23.16■■□□□ 1.3
CHD3-204ENST00000439235 IGSF9BQ9UPX0 1349 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 GSTTP1A0A1W2PQM5 241 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 TCF7P36402 384 aaPredicted RBP23.15■■□□□ 1.3
CHD3-204ENST00000439235 TRIM32Q13049 653 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 ECM1Q16610 540 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 NAALADL2Q58DX5 795 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 MAP3K21Q5TCX8 1036 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 SWSAP1Q6NVH7 229 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 PDXDC2PQ6P474 469 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 CCDC60Q8IWA6 550 aaPredicted RBP23.15■■□□□ 1.3
CHD3-204ENST00000439235 C4orf19Q8IY42 314 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 LARP4BQ92615 738 aaKnown RBP23.15■■□□□ 1.3
CHD3-204ENST00000439235 NACC1Q96RE7 527 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 AP5M1Q9H0R1 490 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 AZI2Q9H6S1 392 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 ZNF302Q9NR11 478 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 DNM3Q9UQ16 869 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 PTPN22Q9Y2R2 807 aa23.15■■□□□ 1.3
CHD3-204ENST00000439235 EMSYQ7Z589 1322 aa23.14■■□□□ 1.3
CHD3-204ENST00000439235 IGKV6D-21A0A0A0MT36 114 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 ADCY6O43306 1168 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 DUSP11O75319 330 aaKnown RBP23.14■■□□□ 1.29
CHD3-204ENST00000439235 INHAP05111 366 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 CNGA1P29973 690 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 AFG1LQ8WV93 481 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 RAD54LQ92698 747 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 TNMDQ9H2S6 317 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 TMEM63CQ9P1W3 806 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 TELO2Q9Y4R8 837 aa23.14■■□□□ 1.29
CHD3-204ENST00000439235 LGR5O75473 907 aa23.13■■□□□ 1.29
CHD3-204ENST00000439235 UGCGQ16739 394 aa23.13■■□□□ 1.29
CHD3-204ENST00000439235 BRDTQ58F21 947 aaPredicted RBP23.13■■□□□ 1.29
CHD3-204ENST00000439235 AFAP1L1Q8TED9 768 aa23.13■■□□□ 1.29
CHD3-204ENST00000439235 LRRC27Q9C0I9 530 aa23.13■■□□□ 1.29
CHD3-204ENST00000439235 BLOC1S4Q9NUP1 217 aa23.13■■□□□ 1.29
CHD3-204ENST00000439235 E9PMD0 336 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 DYNC1LI2O43237 492 aaPredicted RBP23.12■■□□□ 1.29
CHD3-204ENST00000439235 EYA4O95677 639 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 MMP3P08254 477 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 RARBP10826 455 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 AMPD3Q01432 767 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 SV2BQ7L1I2 683 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 KCNK18Q7Z418 384 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 CTU1Q7Z7A3 348 aaKnown RBP23.12■■□□□ 1.29
CHD3-204ENST00000439235 LRRC15Q8TF66 581 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 DOCK5Q9H7D0 1870 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 SPC25Q9HBM1 224 aa23.12■■□□□ 1.29
CHD3-204ENST00000439235 WRAP73Q9P2S5 460 aaPredicted RBP23.12■■□□□ 1.29
CHD3-204ENST00000439235 MAFBQ9Y5Q3 323 aaPredicted RBP23.12■■□□□ 1.29
CHD3-204ENST00000439235 PLA2G4BP0C869 781 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 XRCC6P12956 609 aaKnown RBP eCLIP23.11■■□□□ 1.29
CHD3-204ENST00000439235 PTGS1P23219 599 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 CCND3P30281 292 aaPredicted RBP23.11■■□□□ 1.29
CHD3-204ENST00000439235 CPT1AP50416 773 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 SLC26A2P50443 739 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 STAT5BP51692 787 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 LBX1P52954 281 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 PRKCEQ02156 737 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms