RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 RDM1Q8NG50 284 aa19.06■□□□□ 0.64
TARDBP-203ENST00000439080 AFAP1L1Q8TED9 768 aa19.06■□□□□ 0.64
TARDBP-203ENST00000439080 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.06■□□□□ 0.64
TARDBP-203ENST00000439080 TRMT13Q9NUP7 481 aaKnown RBP19.06■□□□□ 0.64
TARDBP-203ENST00000439080 HDAC6Q9UBN7 1215 aa19.06■□□□□ 0.64
TARDBP-203ENST00000439080 GTF2IRD1Q9UHL9 959 aa19.06■□□□□ 0.64
TARDBP-203ENST00000439080 DCDC2CA8MYV0 355 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
TARDBP-203ENST00000439080 SMIM10L2AP0DMW4 78 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 SMIM10L2BP0DMW5 78 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 TXKP42681 527 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 PKP1Q13835 747 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 NCAPH2Q6IBW4 605 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 SWSAP1Q6NVH7 229 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 PLPPR4Q7Z2D5 763 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 TRPV6Q9H1D0 765 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 RNPEPQ9H4A4 650 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 TTC12Q9H892 705 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-203ENST00000439080 PRDM5Q9NQX1 630 aaPredicted RBP19.05■□□□□ 0.64
TARDBP-203ENST00000439080 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 GABBR1Q9UBS5 961 aa19.05■□□□□ 0.64
TARDBP-203ENST00000439080 EML1O00423 815 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 CD4P01730 458 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 PDIA4P13667 645 aaKnown RBP19.04■□□□□ 0.64
TARDBP-203ENST00000439080 SLC26A2P50443 739 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 FAAP100Q0VG06 881 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 PTGDRQ13258 359 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 UGCGQ16739 394 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 GDF6Q6KF10 455 aaPredicted RBP19.04■□□□□ 0.64
TARDBP-203ENST00000439080 PDXDC2PQ6P474 469 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 PCDHA12Q9UN75 941 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 TRPC6Q9Y210 931 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 CEP290O15078 2479 aa19.04■□□□□ 0.64
TARDBP-203ENST00000439080 POTEMA6NI47 508 aa19.03■□□□□ 0.64
TARDBP-203ENST00000439080 PLCB4Q15147 1175 aa19.03■□□□□ 0.64
TARDBP-203ENST00000439080 FOXD4L5Q5VV16 416 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-203ENST00000439080 C4orf32Q8N8J7 132 aa19.03■□□□□ 0.64
TARDBP-203ENST00000439080 FOXD4L4Q8WXT5 416 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-203ENST00000439080 ZSCAN16Q9H4T2 348 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-203ENST00000439080 PCDH10Q9P2E7 1040 aa19.03■□□□□ 0.64
TARDBP-203ENST00000439080 NOD1Q9Y239 953 aa19.03■□□□□ 0.64
TARDBP-203ENST00000439080 MAFBQ9Y5Q3 323 aaPredicted RBP19.03■□□□□ 0.64
TARDBP-203ENST00000439080 NR2E3Q9Y5X4 410 aa19.03■□□□□ 0.64
TARDBP-203ENST00000439080 SIP14410 1827 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 C17orf102A2RUQ5 167 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 LAD1O00515 517 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 ZSCAN22P10073 491 aaPredicted RBP19.02■□□□□ 0.64
TARDBP-203ENST00000439080 HOXC8P31273 242 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 ANP32AP39687 249 aaKnown RBP19.02■□□□□ 0.64
TARDBP-203ENST00000439080 PPFIA1Q13136 1202 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 HIC1Q14526 733 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 PTGISQ16647 500 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 FAM173BQ6P4H8 233 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 SH3RF1Q7Z6J0 888 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 BANK1Q8NDB2 785 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 ATP8B4Q8TF62 1192 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 LMBR1Q8WVP7 490 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 TBX21Q9UL17 535 aa19.02■□□□□ 0.64
TARDBP-203ENST00000439080 ZMYND8Q9ULU4 1186 aaPredicted RBP19.02■□□□□ 0.64
TARDBP-203ENST00000439080 LOXHD1Q8IVV2 1947 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 F13A1P00488 732 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 SYN1P17600 705 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 ATP4AP20648 1035 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 TECP42680 631 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 ATP2C1P98194 919 aaPredicted RBP19.01■□□□□ 0.63
TARDBP-203ENST00000439080 PRKCEQ02156 737 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 GRIK4Q16099 956 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 TMEM266Q2M3C6 531 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 CKAP2LQ8IYA6 745 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 ATP6V0A1Q93050 837 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 CTAGE1Q96RT6 745 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 FTOQ9C0B1 505 aaKnown RBP eCLIP19.01■□□□□ 0.63
TARDBP-203ENST00000439080 TMEM39AQ9NV64 488 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 SETD4Q9NVD3 440 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 PRKAG2Q9UGJ0 569 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 NRCAMQ92823 1304 aa19.01■□□□□ 0.63
TARDBP-203ENST00000439080 POTEB3A0JP26 581 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 ZNF862O60290 1169 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 OATP04181 439 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 PRPHP41219 470 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.632e-7■■□□□ 11.5
TARDBP-203ENST00000439080 ZNF200P98182 395 aaPredicted RBP19■□□□□ 0.63
TARDBP-203ENST00000439080 EPHA7Q15375 998 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 POTEBQ6S5H4 581 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 FAM167AQ96KS9 214 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 LXNQ9BS40 222 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 SCN5AQ14524 2016 aa19■□□□□ 0.63
TARDBP-203ENST00000439080 EVPLQ92817 2033 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 TRIM43BA6NCK2 446 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 KIAA0355O15063 1070 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 GNAT1P11488 350 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 CYP2C9P11712 490 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 INSRRP14616 1297 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 IGBP1P78318 339 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 CYP4A11Q02928 519 aa18.99■□□□□ 0.63
TARDBP-203ENST00000439080 SF3A1Q15459 793 aaKnown RBP18.99■□□□□ 0.63
TARDBP-203ENST00000439080 TRMT1LQ7Z2T5 733 aaKnown RBP18.99■□□□□ 0.63
TARDBP-203ENST00000439080 BBXQ8WY36 941 aaPredicted RBP18.99■□□□□ 0.63
TARDBP-203ENST00000439080 TRIM43Q96BQ3 446 aaPredicted RBP18.99■□□□□ 0.63
TARDBP-203ENST00000439080 COL1A2P08123 1366 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms