RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 FBXO47Q5MNV8 452 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 ZBTB10Q96DT7 871 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 VAT1LQ9HCJ6 419 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 TMEM260Q9NX78 707 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 DLL3Q9NYJ7 618 aa11.37□□□□□ -0.59
SMPD4-208ENST00000439029 CCDC171Q6TFL3 1326 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 ATRXP46100 2492 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 ZFHX4Q86UP3 3567 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 DHX16O60231 1041 aaKnown RBP11.36□□□□□ -0.59
SMPD4-208ENST00000439029 FGF18O76093 207 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 SRGAP2BP0DMP2 458 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 HSPD1P10809 573 aaKnown RBP11.36□□□□□ -0.59
SMPD4-208ENST00000439029 AOC1P19801 751 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 HOXA13P31271 388 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-208ENST00000439029 MGAT3Q09327 533 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 QRICH1Q2TAL8 776 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 MCF2L2Q86YR7 1114 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 NPAS4Q8IUM7 802 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 THNSL1Q8IYQ7 743 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 CDCA3Q99618 268 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-208ENST00000439029 PDCD2LQ9BRP1 358 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 PCDHB12Q9Y5F1 795 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 CDY2AQ9Y6F7 541 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
SMPD4-208ENST00000439029 HIDE1A8MVS5 230 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 STK25O00506 426 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 FSCN2O14926 492 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 ORC4O43929 436 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 ADAM17P78536 824 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 TMEM62Q0P6H9 643 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 KCNC3Q14003 757 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 COL9A2Q14055 689 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-208ENST00000439029 TMEM184AQ6ZMB5 413 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 ADGRF4Q8IZF3 695 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 CRIPAKQ8N1N5 446 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 C12orf76Q8N812 135 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-208ENST00000439029 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 LRRCC1Q9C099 1032 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-208ENST00000439029 LRFN2Q9ULH4 789 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 DOCK5Q9H7D0 1870 aa11.35□□□□□ -0.59
SMPD4-208ENST00000439029 TBKBP1A7MCY6 615 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 SNHG28P0DPA3 235 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 SCG2P13521 617 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 PGM5Q15124 567 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 KCNV1Q6PIU1 500 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 TSHZ1Q6ZSZ6 1077 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 VSIG10LQ86VR7 867 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 SIX5Q8N196 739 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 TDRD5Q8NAT2 981 aaKnown RBP11.34□□□□□ -0.59
SMPD4-208ENST00000439029 GPR20Q99678 358 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 TCF25Q9BQ70 676 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 USP26Q9BXU7 913 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 ERVK-5Q9HDB9 667 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 ENTPD7Q9NQZ7 604 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 MRPL11Q9Y3B7 192 aaKnown RBP11.34□□□□□ -0.59
SMPD4-208ENST00000439029 CHD6Q8TD26 2715 aa11.34□□□□□ -0.59
SMPD4-208ENST00000439029 OPLAHO14841 1288 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 MARK3P27448 753 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 HAND2P61296 217 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 IGBP1P78318 339 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 UBE3AQ05086 875 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 TMEM266Q2M3C6 531 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 ZMYM1Q5SVZ6 1142 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 RARS2Q5T160 578 aaKnown RBP11.33□□□□□ -0.6
SMPD4-208ENST00000439029 FAM102BQ5T8I3 360 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 CES5AQ6NT32 575 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 FCHSD1Q86WN1 690 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 RUBCNQ92622 972 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 ADAM7Q9H2U9 754 aa11.33□□□□□ -0.6
SMPD4-208ENST00000439029 TYW1Q9NV66 732 aaKnown RBP11.33□□□□□ -0.6
SMPD4-208ENST00000439029 DCDC2BA2VCK2 349 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 HOXB8P17481 243 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-208ENST00000439029 CCND2P30279 289 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 CA8P35219 290 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 PBX3P40426 434 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 HSD17B4P51659 736 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
SMPD4-208ENST00000439029 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
SMPD4-208ENST00000439029 PPFIA1Q13136 1202 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 GPATCH4Q5T3I0 446 aaKnown RBP11.32□□□□□ -0.6
SMPD4-208ENST00000439029 TAF2Q6P1X5 1199 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 RSPH3Q86UC2 560 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 CHAMP1Q96JM3 812 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 RTP3Q9BQQ7 232 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 TMX1Q9H3N1 280 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 AAASQ9NRG9 546 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 RTEL1Q9NZ71 1219 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms